Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 AC234771.5-201ENST00000600161 514 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 uc_338.13-201ENST00000618243 179 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 AC055839.1-201ENST00000634467 498 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC65Q8IXS2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 RNA5SP175-201ENST00000364275 119 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 RPS4XP9-201ENST00000405151 780 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AL603766.1-201ENST00000407763 664 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 SNORA11F-201ENST00000408237 128 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AC096644.3-201ENST00000416788 338 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AL355994.1-201ENST00000424379 260 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 NDUFA12P1-201ENST00000455914 406 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 SEPT14P1-201ENST00000458703 648 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 SEPT7P6-201ENST00000469999 1143 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 RN7SL205P-201ENST00000490174 284 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AL133372.1-201ENST00000493565 745 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 RPS6P4-201ENST00000494693 758 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AL139286.1-201ENST00000604465 483 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AL021997.2-201ENST00000615674 271 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 RN7SL722P-201ENST00000617780 284 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 RN7SL565P-201ENST00000618246 284 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AC019278.1-201ENST00000623516 479 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 AL356489.2-201ENST00000566968 3528 ntBASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC65Q8IXS2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 MIR331-201ENST00000362302 94 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 MIR585-201ENST00000384887 94 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC097374.1-203ENST00000400783 485 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AL139039.2-201ENST00000407436 479 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AL160275.2-201ENST00000412010 394 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC099336.2-201ENST00000422457 254 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 EIF1P3-201ENST00000423841 334 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 PHBP16-201ENST00000446318 950 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 ABCF2P2-201ENST00000450549 296 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC099560.2-201ENST00000457554 255 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 RPL7P22-201ENST00000466005 733 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 RPS26P28-201ENST00000470806 348 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 RNU4-18P-201ENST00000516751 149 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC021483.2-201ENST00000567415 758 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 HNRNPCP4-201ENST00000571636 900 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 MIR4715-201ENST00000584117 79 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC113403.1-201ENST00000604910 193 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC025175.1-201ENST00000606482 759 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC090948.1-201ENST00000607464 549 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AL035461.2-201ENST00000619201 524 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AP000346.3-201ENST00000622821 210 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC105074.1-201ENST00000623380 3095 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 AC017104.4-201ENST00000636283 1592 ntBASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC65Q8IXS2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC090017.1-201ENST00000548612 1779 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 MIR448-201ENST00000362131 111 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms