Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 BCORP1-203ENST00000513194 5093 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 FGF7P2-201ENST00000332473 296 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 IGKV7-3-201ENST00000357453 298 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 RNY4P24-201ENST00000362735 96 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 RNA5SP500-201ENST00000364486 119 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 RNU6-619P-201ENST00000365146 108 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 RN7SKP81-201ENST00000365603 331 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 RPL23AP17-201ENST00000401064 499 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 RN7SKP286-201ENST00000410894 299 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 RN7SKP29-201ENST00000410957 272 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 RPS7P13-201ENST00000413955 498 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 UBTFL3-201ENST00000418934 1024 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC092647.1-201ENST00000420654 287 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 SKP1P3-201ENST00000429280 487 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC091862.1-201ENST00000438016 1100 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 HMGN1P36-201ENST00000446623 298 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 REG1CP-206ENST00000447469 496 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AL592447.1-201ENST00000447592 540 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 DNAJB5P1-201ENST00000454004 806 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AL445687.2-201ENST00000458156 728 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 OR9M1P-201ENST00000459641 921 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AL355032.1-201ENST00000472981 438 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 UBTFL6-201ENST00000477929 1024 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC126182.1-201ENST00000478134 357 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 CR383656.1-201ENST00000484916 377 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 HMGN2P25-201ENST00000486956 268 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC008945.1-201ENST00000505144 499 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC116353.2-201ENST00000505332 712 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC098799.3-201ENST00000506095 438 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 IGBP1P5-201ENST00000507524 1000 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 RNU6-718P-201ENST00000516166 105 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC009063.1-201ENST00000563342 702 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 OR4G1P-201ENST00000588632 938 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC012065.4-201ENST00000602445 679 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AP000403.1-201ENST00000603349 851 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC006566.1-201ENST00000608943 513 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AL589743.7-201ENST00000612637 233 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AL008636.1-201ENST00000625038 1018 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC232271.1-201ENST00000602455 2715 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 AC016745.2-201ENST00000608834 3443 ntBASIC5.7□□□□□ -1.5
TRIM48Q8IWZ4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC093311.1-201ENST00000506586 2021 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms