Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC073063.1-201ENST00000434352 607 ntBASIC3.26□□□□□ -1.89
VPS13CQ709C8 RPL36AP13-201ENST00000457490 317 ntBASIC3.26□□□□□ -1.89
VPS13CQ709C8 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS13CQ709C8 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS13CQ709C8 PRELID3BP3-201ENST00000584963 545 ntBASIC3.26□□□□□ -1.89
VPS13CQ709C8 BDH2P1-201ENST00000602288 736 ntBASIC3.26□□□□□ -1.89
VPS13CQ709C8 AC006077.1-201ENST00000604746 343 ntBASIC3.26□□□□□ -1.89
VPS13CQ709C8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.26□□□□□ -1.89
VPS13CQ709C8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 THAP12P5-201ENST00000405864 2275 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 SNORD96B-201ENST00000386148 79 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC079171.1-201ENST00000568788 914 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 AP005264.7-201ENST00000625003 745 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 MTCO1P12-201ENST00000414273 1543 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 RN7SKP186-201ENST00000365371 303 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC027216.1-201ENST00000577726 685 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC090246.1-201ENST00000616499 426 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC138907.10-201ENST00000623708 983 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC233263.6-201ENST00000631132 1963 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 VPS35P1-201ENST00000563400 1518 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC025518.1-201ENST00000479856 347 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 AL513477.2-201ENST00000607858 568 ntBASIC3.25□□□□□ -1.89
VPS13CQ709C8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
VPS13CQ709C8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS13CQ709C8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS13CQ709C8 AL022393.1-201ENST00000625142 1677 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS13CQ709C8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS13CQ709C8 NAP1L4P1-201ENST00000319092 1157 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 RPL5P2-201ENST00000429598 854 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 RPS26P4-201ENST00000431743 355 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 AL445433.1-201ENST00000457507 257 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 AC037198.2-201ENST00000478845 733 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 RN7SKP289-201ENST00000517244 295 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS13CQ709C8 AC138932.5-201ENST00000617759 563 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 AF117829.1-206ENST00000621883 3802 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 SCARNA15.3-201ENST00000626315 122 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 SCARNA4.1-201ENST00000628597 123 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 AL136164.3-201ENST00000624429 3978 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS13CQ709C8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 HSPD1P21-201ENST00000436541 245 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS13CQ709C8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 MIR8058-201ENST00000615737 89 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 MIR7112-201ENST00000616126 65 ntBASIC3.24□□□□□ -1.89
VPS13CQ709C8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS13CQ709C8 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS13CQ709C8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms