Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.62□□□□□ -1.51
USP39Q53GS9 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.62□□□□□ -1.51
USP39Q53GS9 CBX3P3-201ENST00000508108 532 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AC079140.3-201ENST00000511111 550 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 RN7SKP66-201ENST00000516681 231 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.62□□□□□ -1.51
USP39Q53GS9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.62□□□□□ -1.51
USP39Q53GS9 AP004247.1-201ENST00000531556 1289 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.62□□□□□ -1.51
USP39Q53GS9 AC126177.5-201ENST00000549599 178 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.62□□□□□ -1.51
USP39Q53GS9 HSPE1P2-201ENST00000554777 306 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AL049830.4-201ENST00000555149 351 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.62□□□□□ -1.51
USP39Q53GS9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.62□□□□□ -1.51
USP39Q53GS9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.62□□□□□ -1.51
USP39Q53GS9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.62□□□□□ -1.51
USP39Q53GS9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 ELOCP28-201ENST00000590044 317 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 SLC25A36P1-201ENST00000590111 465 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 AL513327.3-201ENST00000602618 469 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AC021749.1-201ENST00000604322 607 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AC126118.1-201ENST00000607744 628 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AL049539.1-201ENST00000611964 459 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AC004223.4-201ENST00000612426 332 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AL118522.2-201ENST00000616045 615 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AP002505.2-201ENST00000623585 696 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
USP39Q53GS9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
USP39Q53GS9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 AC004076.2-201ENST00000620532 3323 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.62□□□□□ -1.51
USP39Q53GS9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP39Q53GS9 MFSD8-239ENST00000641590 2479 ntBASIC5.62□□□□□ -1.51
USP39Q53GS9 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP39Q53GS9 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
USP39Q53GS9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
USP39Q53GS9 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP39Q53GS9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP39Q53GS9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.61□□□□□ -1.51
USP39Q53GS9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP39Q53GS9 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP39Q53GS9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.61□□□□□ -1.51
USP39Q53GS9 Y_RNA.248-201ENST00000364501 109 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
USP39Q53GS9 SNORA26.8-201ENST00000391306 124 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 DEFB108C-201ENST00000400154 252 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AL589647.1-201ENST00000402485 466 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AL031577.2-201ENST00000404133 280 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 RPS3AP24-201ENST00000407896 734 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.61□□□□□ -1.51
USP39Q53GS9 PNRC2P1-201ENST00000423940 420 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 ZNF833P-201ENST00000424938 1494 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP39Q53GS9 AL138787.1-202ENST00000437804 898 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.61□□□□□ -1.51
USP39Q53GS9 MEMO1P4-201ENST00000453590 386 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AC004129.2-201ENST00000457229 287 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AC022336.1-201ENST00000475510 337 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 RPL30P6-201ENST00000475925 342 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.61□□□□□ -1.51
USP39Q53GS9 AC112198.1-201ENST00000505369 1220 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AC093815.1-201ENST00000508637 280 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AC109458.1-201ENST00000508858 316 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AC021146.7-201ENST00000509604 775 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AC108043.1-201ENST00000512696 574 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.61□□□□□ -1.51
USP39Q53GS9 HIGD1AP10-201ENST00000527837 282 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.61□□□□□ -1.51
USP39Q53GS9 OR5D15P-201ENST00000531671 942 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.61□□□□□ -1.51
USP39Q53GS9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP39Q53GS9 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.61□□□□□ -1.51
USP39Q53GS9 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
USP39Q53GS9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.61□□□□□ -1.51
USP39Q53GS9 NBEAP1-201ENST00000554452 979 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.61□□□□□ -1.51
USP39Q53GS9 AC136619.2-201ENST00000563361 631 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 AC107021.2-201ENST00000567714 2095 ntBASIC5.61□□□□□ -1.51
USP39Q53GS9 MIR3691-201ENST00000578066 90 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms