Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 SNORA79B-201ENST00000410557 148 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 RN7SKP182-201ENST00000410772 298 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF1Q12946 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXF1Q12946 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF1Q12946 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXF1Q12946 DYNLL1P7-201ENST00000429273 258 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 AC069285.2-201ENST00000440210 275 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF1Q12946 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXF1Q12946 RPL7AP52-201ENST00000458096 790 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 SEPT14P1-201ENST00000458703 648 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 CEACAMP10-202ENST00000495431 496 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 BNIP3P41-201ENST00000503774 571 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF1Q12946 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF1Q12946 CYCSP29-201ENST00000533731 318 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXF1Q12946 AC124068.1-201ENST00000563131 678 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.8□□□□□ -1.8
FOXF1Q12946 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 AC008638.3-201ENST00000603341 463 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXF1Q12946 AL031666.3-201ENST00000609320 1006 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 AL445567.2-201ENST00000618935 498 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
FOXF1Q12946 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXF1Q12946 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF1Q12946 AC018529.3-201ENST00000624212 2254 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXF1Q12946 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF1Q12946 MAPK10-253ENST00000641010 4072 ntBASIC3.8□□□□□ -1.8
FOXF1Q12946 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
FOXF1Q12946 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF1Q12946 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF1Q12946 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
FOXF1Q12946 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
FOXF1Q12946 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
FOXF1Q12946 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXF1Q12946 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXF1Q12946 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXF1Q12946 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXF1Q12946 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
FOXF1Q12946 OR52B1P-201ENST00000316506 909 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 AL672167.2-201ENST00000377164 879 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXF1Q12946 AL049693.1-201ENST00000402760 611 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.79□□□□□ -1.8
FOXF1Q12946 RNA5SP39-201ENST00000411245 120 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 AL590806.1-201ENST00000415818 853 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXF1Q12946 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXF1Q12946 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXF1Q12946 BX119904.1-201ENST00000432026 348 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXF1Q12946 HLA-N-201ENST00000437516 135 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 RPL23AP89-201ENST00000439324 255 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 RPL10P17-201ENST00000453852 316 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 RPS23P7-201ENST00000466210 444 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.79□□□□□ -1.8
FOXF1Q12946 HMGB3P13-201ENST00000511263 607 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 AC099522.1-202ENST00000514718 367 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 RN7SKP122-201ENST00000515923 296 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 RNA5SP154-201ENST00000516193 111 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 MRPL49P2-201ENST00000521066 465 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 AC063950.1-201ENST00000552036 308 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXF1Q12946 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXF1Q12946 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXF1Q12946 ELOCP28-201ENST00000590044 317 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FOXF1Q12946 AC138907.10-201ENST00000623708 983 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXF1Q12946 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
FOXF1Q12946 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXF1Q12946 AC092162.3-201ENST00000624511 1624 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 AL133243.3-201ENST00000617415 3004 ntBASIC3.79□□□□□ -1.8
FOXF1Q12946 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXF1Q12946 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXF1Q12946 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXF1Q12946 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FOXF1Q12946 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXF1Q12946 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXF1Q12946 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXF1Q12946 RNA5SP513-201ENST00000364648 118 ntBASIC3.78□□□□□ -1.8
FOXF1Q12946 RHOT1P2-201ENST00000366423 333 ntBASIC3.78□□□□□ -1.8
FOXF1Q12946 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXF1Q12946 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXF1Q12946 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FOXF1Q12946 AC234779.1-201ENST00000425910 285 ntBASIC3.78□□□□□ -1.8
FOXF1Q12946 HMGB3P9-201ENST00000441799 583 ntBASIC3.78□□□□□ -1.8
FOXF1Q12946 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.78□□□□□ -1.8
FOXF1Q12946 NUTF2P3-201ENST00000448540 384 ntBASIC3.78□□□□□ -1.8
FOXF1Q12946 RNU7-157P-201ENST00000459600 66 ntBASIC3.78□□□□□ -1.8
FOXF1Q12946 AC010618.1-201ENST00000469924 477 ntBASIC3.78□□□□□ -1.8
FOXF1Q12946 RPS27AP13-201ENST00000498403 237 ntBASIC3.78□□□□□ -1.8
FOXF1Q12946 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.78□□□□□ -1.8
FOXF1Q12946 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms