Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS1Q01581 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS1Q01581 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 MIR331-201ENST00000362302 94 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 RNA5SP28-201ENST00000363841 119 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 RNA5SP175-201ENST00000364275 119 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS1Q01581 NCSTNP1-201ENST00000406229 144 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 AL161631.1-201ENST00000417933 486 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 CYCSP10-201ENST00000417973 294 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 AC022022.1-201ENST00000430304 178 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 IFITM8P-201ENST00000522529 394 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 PDCD5P1-201ENST00000543528 309 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 RPL12P25-202ENST00000598100 674 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 AC233280.2-201ENST00000603917 1070 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 LINC00901.1-201ENST00000617252 152 ntBASIC4.14□□□□□ -1.75
HMGCS1Q01581 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS1Q01581 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS1Q01581 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS1Q01581 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS1Q01581 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS1Q01581 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 OR5P1P-201ENST00000299512 925 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 RPL23AP59-201ENST00000399415 461 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 CNOT7P1-201ENST00000429006 852 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC099063.2-201ENST00000446360 662 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC073587.1-201ENST00000447093 876 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 snoU13.1-201ENST00000459157 104 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 RN7SL459P-201ENST00000481078 302 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 RPS27AP16-201ENST00000492222 470 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC104164.2-201ENST00000496953 495 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC006499.6-201ENST00000511169 607 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 MTCYBP19-201ENST00000517463 1124 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 NPM1P52-201ENST00000518264 846 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC027176.2-201ENST00000559166 746 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC124068.1-201ENST00000563131 678 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC021483.2-201ENST00000567415 758 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 MIR4715-201ENST00000584117 79 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC008745.1-201ENST00000604064 271 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AL356274.1-201ENST00000617064 410 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC002044.3-201ENST00000623314 541 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HMGCS1Q01581 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS1Q01581 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS1Q01581 ASNSP1-201ENST00000518311 1939 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS1Q01581 AC006971.1-201ENST00000407916 4486 ntBASIC4.13□□□□□ -1.75
HMGCS1Q01581 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS1Q01581 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS1Q01581 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS1Q01581 AC025031.4-201ENST00000621248 3271 ntBASIC4.12□□□□□ -1.75
HMGCS1Q01581 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS1Q01581 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS1Q01581 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS1Q01581 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 MIR513A2-201ENST00000385249 127 ntBASIC4.12□□□□□ -1.75
HMGCS1Q01581 RPS27AP7-201ENST00000422792 455 ntBASIC4.12□□□□□ -1.75
HMGCS1Q01581 RBMY1KP-201ENST00000423480 476 ntBASIC4.12□□□□□ -1.75
HMGCS1Q01581 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 AC068287.1-201ENST00000430283 295 ntBASIC4.12□□□□□ -1.75
HMGCS1Q01581 RPL12P28-201ENST00000430852 489 ntBASIC4.12□□□□□ -1.75
HMGCS1Q01581 CEACAMP1-201ENST00000434624 1035 ntBASIC4.12□□□□□ -1.75
HMGCS1Q01581 RPL23AP52-201ENST00000439311 478 ntBASIC4.12□□□□□ -1.75
HMGCS1Q01581 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 TXNP2-201ENST00000443918 295 ntBASIC4.12□□□□□ -1.75
HMGCS1Q01581 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGCS1Q01581 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGCS1Q01581 MTND2P28-201ENST00000457540 1044 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms