Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.17□□□□□ -1.9
CKS1BP61024 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKS1BP61024 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.17□□□□□ -1.9
CKS1BP61024 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS1BP61024 SNORD95-201ENST00000579879 68 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC091178.1-203ENST00000584586 279 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC008759.1-201ENST00000589783 983 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC067852.4-201ENST00000590314 478 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.17□□□□□ -1.9
CKS1BP61024 VN1R81P-201ENST00000602085 372 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC034236.3-201ENST00000605999 461 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AL512329.2-201ENST00000607350 548 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS1BP61024 EIF3FP1-201ENST00000613970 806 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CKS1BP61024 AC092628.2-201ENST00000622492 339 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.17□□□□□ -1.9
CKS1BP61024 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.17□□□□□ -1.9
CKS1BP61024 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 SAGE2P-201ENST00000420011 2126 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKS1BP61024 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKS1BP61024 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS1BP61024 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKS1BP61024 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CKS1BP61024 AL355852.1-201ENST00000454081 1771 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKS1BP61024 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CKS1BP61024 SNURFL-201ENST00000309296 343 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CKS1BP61024 EI24P2-201ENST00000397776 1076 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKS1BP61024 Z98745.1-201ENST00000402553 494 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AP002530.1-201ENST00000405705 684 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 HMGB1P13-201ENST00000406019 642 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 VN1R8P-201ENST00000407739 893 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.16□□□□□ -1.9
CKS1BP61024 AP000534.2-201ENST00000412729 568 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AC114755.2-201ENST00000413520 361 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 NPM1P4-201ENST00000414095 812 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.16□□□□□ -1.9
CKS1BP61024 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.16□□□□□ -1.9
CKS1BP61024 AL121776.1-201ENST00000429337 372 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.16□□□□□ -1.9
CKS1BP61024 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.16□□□□□ -1.9
CKS1BP61024 TDGF1P1-201ENST00000445734 527 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AC073850.1-201ENST00000449243 255 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AC234781.3-201ENST00000452540 973 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AC023141.9-201ENST00000458734 412 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CKS1BP61024 AC078817.1-201ENST00000492623 435 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AC005912.1-201ENST00000495392 255 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AC025164.1-201ENST00000496249 478 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.16□□□□□ -1.9
CKS1BP61024 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.16□□□□□ -1.9
CKS1BP61024 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.16□□□□□ -1.9
CKS1BP61024 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.16□□□□□ -1.9
CKS1BP61024 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.16□□□□□ -1.9
CKS1BP61024 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.16□□□□□ -1.9
CKS1BP61024 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CKS1BP61024 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.16□□□□□ -1.9
CKS1BP61024 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.16□□□□□ -1.9
CKS1BP61024 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.16□□□□□ -1.9
CKS1BP61024 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CKS1BP61024 AL389895.1-201ENST00000554127 252 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.16□□□□□ -1.9
CKS1BP61024 AC011447.4-201ENST00000587562 111 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CKS1BP61024 AL031666.3-201ENST00000609320 1006 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.16□□□□□ -1.9
CKS1BP61024 MIR4278-201ENST00000636094 69 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 AL049767.1-202ENST00000637826 242 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CKS1BP61024 AC233968.1-201ENST00000611212 1300 ntBASIC3.16□□□□□ -1.9
CKS1BP61024 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
CKS1BP61024 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CKS1BP61024 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CKS1BP61024 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.15□□□□□ -1.9
CKS1BP61024 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CKS1BP61024 RNA5SP183-201ENST00000362452 119 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 RN7SKP269-201ENST00000365545 319 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CKS1BP61024 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CKS1BP61024 MIR223-201ENST00000385204 110 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.15□□□□□ -1.91
CKS1BP61024 RAB9AP4-201ENST00000415230 609 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AC048351.1-201ENST00000420064 602 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.15□□□□□ -1.91
CKS1BP61024 CENPIP1-201ENST00000425713 902 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 HMGB1P32-201ENST00000425971 565 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.15□□□□□ -1.91
CKS1BP61024 PRPF38AP2-201ENST00000438179 851 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 CYCSP43-201ENST00000438233 310 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.15□□□□□ -1.91
CKS1BP61024 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.15□□□□□ -1.91
CKS1BP61024 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.15□□□□□ -1.91
CKS1BP61024 FAR2P1-206ENST00000449736 709 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.15□□□□□ -1.91
CKS1BP61024 AC110749.1-201ENST00000462007 357 ntBASIC3.15□□□□□ -1.91
CKS1BP61024 RPL23AP14-201ENST00000468281 468 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms