Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.56□□□□□ -1.68
CLDN20P56880 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 AL133268.1-201ENST00000405676 1401 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 HSPA8P17-201ENST00000427029 1382 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 CASC19-221ENST00000641309 1382 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 SNORA66-201ENST00000384792 133 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLDN20P56880 AL645733.1-201ENST00000402250 217 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.55□□□□□ -1.68
CLDN20P56880 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 MTND2P5-201ENST00000432656 1006 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AL035246.1-201ENST00000433554 1255 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN20P56880 RPL12P3-201ENST00000440080 396 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.55□□□□□ -1.68
CLDN20P56880 AL592437.1-201ENST00000443781 492 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 IGHV5-78-201ENST00000450948 295 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 OTX2P1-201ENST00000450956 354 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC023050.1-201ENST00000498198 304 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC093720.1-201ENST00000505681 714 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN20P56880 AC008837.1-201ENST00000511513 412 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC093752.1-206ENST00000511823 336 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 AC119751.1-201ENST00000513357 765 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 RNA5SP43-201ENST00000516559 110 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN20P56880 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN20P56880 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 NPM1P47-201ENST00000560843 856 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 MIR4646-201ENST00000580775 63 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 MIR4443-201ENST00000585052 53 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN20P56880 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 AC024060.1-201ENST00000607052 494 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN20P56880 AC013468.1-201ENST00000608680 598 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 PART1_2.1-201ENST00000612397 250 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 MIR7973-1-201ENST00000614683 76 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 AC097520.1-201ENST00000624435 385 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
CLDN20P56880 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 SALL4P2-201ENST00000423288 2910 ntBASIC4.55□□□□□ -1.68
CLDN20P56880 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN20P56880 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN20P56880 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
CLDN20P56880 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN20P56880 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN20P56880 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CLDN20P56880 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 AC063976.2-201ENST00000425667 3556 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 IGKV7-3-201ENST00000357453 298 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 RN7SKP104-201ENST00000362605 328 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 RNA5SP428-201ENST00000365129 132 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLDN20P56880 AL109941.1-201ENST00000401925 229 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN20P56880 SNORA77-201ENST00000408716 125 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN20P56880 MTND4P3-201ENST00000417829 541 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 E2F6P2-201ENST00000420708 748 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN20P56880 YWHAEP5-201ENST00000431545 765 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 USP9YP24-201ENST00000434374 697 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN20P56880 ELOCP11-201ENST00000436690 332 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms