Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2A1P52655 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
GTF2A1P52655 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GTF2A1P52655 CPHL1P-201ENST00000461341 3407 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
GTF2A1P52655 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
GTF2A1P52655 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
GTF2A1P52655 RNA5SP178-201ENST00000410380 128 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.18□□□□□ -1.74
GTF2A1P52655 SPRYD7P1-201ENST00000443861 570 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF2A1P52655 NDUFA5P8-201ENST00000449019 346 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 RPL7P39-201ENST00000481157 744 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.18□□□□□ -1.74
GTF2A1P52655 HPRT1P2-201ENST00000505250 544 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
GTF2A1P52655 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GTF2A1P52655 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.18□□□□□ -1.74
GTF2A1P52655 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.18□□□□□ -1.74
GTF2A1P52655 MIR4691-201ENST00000583764 85 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 AC023762.1-201ENST00000603280 584 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 AC126915.2-201ENST00000610957 190 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 AC019278.1-201ENST00000623516 479 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 AL353662.3-201ENST00000625131 237 ntBASIC4.18□□□□□ -1.74
GTF2A1P52655 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF2A1P52655 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF2A1P52655 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF2A1P52655 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
GTF2A1P52655 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
GTF2A1P52655 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
GTF2A1P52655 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
GTF2A1P52655 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF2A1P52655 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.18□□□□□ -1.74
GTF2A1P52655 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2A1P52655 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2A1P52655 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2A1P52655 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.17□□□□□ -1.74
GTF2A1P52655 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.17□□□□□ -1.74
GTF2A1P52655 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2A1P52655 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
GTF2A1P52655 RN7SKP115-201ENST00000363177 317 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 RNA5SP242-201ENST00000364171 118 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 AP000357.1-201ENST00000409926 1165 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.17□□□□□ -1.74
GTF2A1P52655 GTF2IP5-201ENST00000414608 731 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 AL645608.4-201ENST00000423619 154 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2A1P52655 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.17□□□□□ -1.74
GTF2A1P52655 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.17□□□□□ -1.74
GTF2A1P52655 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.17□□□□□ -1.74
GTF2A1P52655 MTCYBP31-201ENST00000438855 1122 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.17□□□□□ -1.74
GTF2A1P52655 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.17□□□□□ -1.74
GTF2A1P52655 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2A1P52655 RPL23AP44-201ENST00000482216 473 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 AC083982.1-201ENST00000485679 344 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.17□□□□□ -1.74
GTF2A1P52655 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.17□□□□□ -1.74
GTF2A1P52655 OR5M2P-201ENST00000529003 936 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 MTND5P21-201ENST00000531961 522 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.17□□□□□ -1.74
GTF2A1P52655 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.17□□□□□ -1.74
GTF2A1P52655 MEMO1P5-201ENST00000604810 406 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 RMST_8.1-201ENST00000610287 165 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.17□□□□□ -1.74
GTF2A1P52655 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.17□□□□□ -1.74
GTF2A1P52655 MIR7153-201ENST00000637758 57 ntBASIC4.17□□□□□ -1.74
GTF2A1P52655 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2A1P52655 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2A1P52655 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2A1P52655 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
GTF2A1P52655 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GTF2A1P52655 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
GTF2A1P52655 CASC19-255ENST00000641733 1385 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
GTF2A1P52655 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.16□□□□□ -1.74
GTF2A1P52655 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GTF2A1P52655 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
GTF2A1P52655 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
GTF2A1P52655 RNA5SP307-201ENST00000362863 116 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 AC104297.1-201ENST00000393779 870 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
GTF2A1P52655 AL607077.1-201ENST00000401718 499 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 AMZ2P2-201ENST00000406819 1057 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.16□□□□□ -1.74
GTF2A1P52655 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.16□□□□□ -1.74
GTF2A1P52655 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.16□□□□□ -1.74
GTF2A1P52655 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
GTF2A1P52655 FHP1-201ENST00000442741 703 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.16□□□□□ -1.74
GTF2A1P52655 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.16□□□□□ -1.74
GTF2A1P52655 DDX39BP2-208ENST00000453923 258 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 TRBV8-2-201ENST00000475637 270 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.16□□□□□ -1.74
GTF2A1P52655 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.16□□□□□ -1.74
GTF2A1P52655 RN7SKP70-201ENST00000516655 271 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.16□□□□□ -1.74
GTF2A1P52655 HIGD1AP10-201ENST00000527837 282 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.16□□□□□ -1.74
GTF2A1P52655 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms