Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.68□□□□□ -1.66
CASP4P49662 AL121890.3-201ENST00000618494 516 ntBASIC4.68□□□□□ -1.66
CASP4P49662 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.68□□□□□ -1.66
CASP4P49662 AC105105.5-201ENST00000622635 1294 ntBASIC4.68□□□□□ -1.66
CASP4P49662 AC140479.6-201ENST00000633535 357 ntBASIC4.68□□□□□ -1.66
CASP4P49662 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.68□□□□□ -1.66
CASP4P49662 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CASP4P49662 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CASP4P49662 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CASP4P49662 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CASP4P49662 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CASP4P49662 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.67□□□□□ -1.66
CASP4P49662 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CASP4P49662 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.67□□□□□ -1.66
CASP4P49662 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CASP4P49662 RNU6-386P-201ENST00000362650 107 ntBASIC4.67□□□□□ -1.66
CASP4P49662 RNA5SP509-201ENST00000364577 119 ntBASIC4.67□□□□□ -1.66
CASP4P49662 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.67□□□□□ -1.66
CASP4P49662 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.67□□□□□ -1.66
CASP4P49662 TPT1P13-201ENST00000449760 499 ntBASIC4.67□□□□□ -1.66
CASP4P49662 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.67□□□□□ -1.66
CASP4P49662 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.67□□□□□ -1.66
CASP4P49662 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.67□□□□□ -1.66
CASP4P49662 RN7SL809P-201ENST00000482040 297 ntBASIC4.67□□□□□ -1.66
CASP4P49662 RN7SL691P-201ENST00000494487 301 ntBASIC4.67□□□□□ -1.66
CASP4P49662 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.67□□□□□ -1.66
CASP4P49662 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CASP4P49662 PGBD4P4-201ENST00000509673 613 ntBASIC4.67□□□□□ -1.66
CASP4P49662 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
CASP4P49662 RAB9BP1-201ENST00000519581 626 ntBASIC4.67□□□□□ -1.66
CASP4P49662 C1GALT1P3-201ENST00000522049 819 ntBASIC4.67□□□□□ -1.66
CASP4P49662 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.67□□□□□ -1.66
CASP4P49662 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.67□□□□□ -1.66
CASP4P49662 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.67□□□□□ -1.66
CASP4P49662 AC124068.1-201ENST00000563131 678 ntBASIC4.67□□□□□ -1.66
CASP4P49662 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.67□□□□□ -1.66
CASP4P49662 AC119501.1-201ENST00000603646 475 ntBASIC4.67□□□□□ -1.66
CASP4P49662 AC025175.1-201ENST00000606482 759 ntBASIC4.67□□□□□ -1.66
CASP4P49662 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.67□□□□□ -1.66
CASP4P49662 MIR7641-1-201ENST00000627518 61 ntBASIC4.67□□□□□ -1.66
CASP4P49662 AC055839.1-201ENST00000634467 498 ntBASIC4.67□□□□□ -1.66
CASP4P49662 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CASP4P49662 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CASP4P49662 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CASP4P49662 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.67□□□□□ -1.66
CASP4P49662 AL592182.3-201ENST00000642132 3304 ntBASIC4.67□□□□□ -1.66
CASP4P49662 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CASP4P49662 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CASP4P49662 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CASP4P49662 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CASP4P49662 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.66□□□□□ -1.66
CASP4P49662 RNU1-132P-201ENST00000364300 164 ntBASIC4.66□□□□□ -1.66
CASP4P49662 RNU4-7P-201ENST00000364758 141 ntBASIC4.66□□□□□ -1.66
CASP4P49662 RNA5SP36-201ENST00000410197 133 ntBASIC4.66□□□□□ -1.66
CASP4P49662 RNU4-25P-201ENST00000410569 230 ntBASIC4.66□□□□□ -1.66
CASP4P49662 RN7SKP235-201ENST00000410662 305 ntBASIC4.66□□□□□ -1.66
CASP4P49662 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CASP4P49662 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.66□□□□□ -1.66
CASP4P49662 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.66□□□□□ -1.66
CASP4P49662 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.66□□□□□ -1.66
CASP4P49662 RPL18P10-201ENST00000425606 538 ntBASIC4.66□□□□□ -1.66
CASP4P49662 HMGB1P32-201ENST00000425971 565 ntBASIC4.66□□□□□ -1.66
CASP4P49662 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.66□□□□□ -1.66
CASP4P49662 AC073143.1-201ENST00000436316 395 ntBASIC4.66□□□□□ -1.66
CASP4P49662 EEF1A1P1-201ENST00000447052 739 ntBASIC4.66□□□□□ -1.66
CASP4P49662 EIF2S2P2-201ENST00000447161 982 ntBASIC4.66□□□□□ -1.66
CASP4P49662 AL133244.1-201ENST00000456007 258 ntBASIC4.66□□□□□ -1.66
CASP4P49662 AC010374.1-201ENST00000503762 1237 ntBASIC4.66□□□□□ -1.66
CASP4P49662 STMN1P2-201ENST00000508435 439 ntBASIC4.66□□□□□ -1.66
CASP4P49662 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.66□□□□□ -1.66
CASP4P49662 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.66□□□□□ -1.66
CASP4P49662 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.66□□□□□ -1.66
CASP4P49662 AC009643.1-201ENST00000532030 391 ntBASIC4.66□□□□□ -1.66
CASP4P49662 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CASP4P49662 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.66□□□□□ -1.66
CASP4P49662 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.66□□□□□ -1.66
CASP4P49662 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.66□□□□□ -1.66
CASP4P49662 AC007620.3-201ENST00000608131 497 ntBASIC4.66□□□□□ -1.66
CASP4P49662 AL353600.1-201ENST00000608148 251 ntBASIC4.66□□□□□ -1.66
CASP4P49662 AL136295.6-201ENST00000610486 658 ntBASIC4.66□□□□□ -1.66
CASP4P49662 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.66□□□□□ -1.66
CASP4P49662 AP000843.1-201ENST00000624880 701 ntBASIC4.66□□□□□ -1.66
CASP4P49662 NOL8P1-201ENST00000508336 3529 ntBASIC4.66□□□□□ -1.66
CASP4P49662 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CASP4P49662 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CASP4P49662 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CASP4P49662 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CASP4P49662 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.66□□□□□ -1.66
CASP4P49662 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.66□□□□□ -1.66
CASP4P49662 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CASP4P49662 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
CASP4P49662 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CASP4P49662 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.65□□□□□ -1.66
CASP4P49662 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.65□□□□□ -1.66
CASP4P49662 OR51C1P-202ENST00000641159 1444 ntBASIC4.65□□□□□ -1.66
CASP4P49662 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.65□□□□□ -1.66
CASP4P49662 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CASP4P49662 RNA5SP28-201ENST00000363841 119 ntBASIC4.65□□□□□ -1.67
CASP4P49662 RNU6-891P-201ENST00000384280 111 ntBASIC4.65□□□□□ -1.67
CASP4P49662 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms