Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.5□□□□□ -1.69
APOBEC1P41238 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.5□□□□□ -1.69
APOBEC1P41238 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
APOBEC1P41238 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 RNA5SP428-201ENST00000365129 132 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 RNU6-906P-201ENST00000384700 70 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
APOBEC1P41238 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC013442.1-201ENST00000397347 228 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 MTCO1P56-201ENST00000401674 224 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AP002530.1-201ENST00000405705 684 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.5□□□□□ -1.69
APOBEC1P41238 QRSL1P2-201ENST00000418582 964 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.5□□□□□ -1.69
APOBEC1P41238 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 VN1R25P-201ENST00000443385 738 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 MTCYBP42-201ENST00000444653 1130 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AL929288.2-201ENST00000446368 407 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 DNAJC19P8-201ENST00000452887 259 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 GYG1P1-201ENST00000460864 698 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 RPS17P2-201ENST00000461663 408 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 RN7SL517P-201ENST00000462240 305 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AC091959.2-201ENST00000477363 321 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 BX284632.1-201ENST00000478218 541 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 RPS3AP6-201ENST00000484430 795 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC008953.1-201ENST00000497334 318 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AC098862.1-201ENST00000504991 413 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AC091860.1-201ENST00000505723 432 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.5□□□□□ -1.69
APOBEC1P41238 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.5□□□□□ -1.69
APOBEC1P41238 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC010306.1-201ENST00000523223 1117 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.5□□□□□ -1.69
APOBEC1P41238 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 MTATP6P24-201ENST00000576835 677 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 MIR4691-201ENST00000583764 85 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 MIR3936-201ENST00000584304 110 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC098935.2-201ENST00000604222 466 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AC006946.3-201ENST00000609791 756 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AL356863.1-201ENST00000623378 1080 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AL353662.3-201ENST00000625131 237 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC092079.1-201ENST00000558620 1985 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AC111188.2-201ENST00000529697 1387 ntBASIC4.5□□□□□ -1.69
APOBEC1P41238 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
APOBEC1P41238 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
APOBEC1P41238 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
APOBEC1P41238 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
APOBEC1P41238 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.5□□□□□ -1.69
APOBEC1P41238 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC1P41238 AC006042.3-201ENST00000454684 1469 ntBASIC4.49□□□□□ -1.69
APOBEC1P41238 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.49□□□□□ -1.69
APOBEC1P41238 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
APOBEC1P41238 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC1P41238 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC1P41238 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC1P41238 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC1P41238 RN7SKP74-201ENST00000362849 309 ntBASIC4.49□□□□□ -1.69
APOBEC1P41238 RNU6-304P-201ENST00000364855 107 ntBASIC4.49□□□□□ -1.69
APOBEC1P41238 SNORA11C-201ENST00000408532 129 ntBASIC4.49□□□□□ -1.69
APOBEC1P41238 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC1P41238 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC1P41238 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.49□□□□□ -1.69
APOBEC1P41238 RPL23AP27-201ENST00000415161 451 ntBASIC4.49□□□□□ -1.69
APOBEC1P41238 SSR1P2-201ENST00000415208 787 ntBASIC4.49□□□□□ -1.69
APOBEC1P41238 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC1P41238 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC1P41238 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC1P41238 GTF2IP2-201ENST00000424290 697 ntBASIC4.49□□□□□ -1.69
APOBEC1P41238 AP001324.1-201ENST00000428553 399 ntBASIC4.49□□□□□ -1.69
APOBEC1P41238 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.49□□□□□ -1.69
APOBEC1P41238 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC1P41238 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.49□□□□□ -1.69
APOBEC1P41238 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.49□□□□□ -1.69
APOBEC1P41238 GTF3AP5-201ENST00000442645 697 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms