Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC241520.1-201ENST00000422654 1099 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 AC004938.1-201ENST00000438468 308 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 MRPL48P1-201ENST00000445390 636 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 RPL7P55-201ENST00000450522 746 ntBASIC5.35□□□□□ -1.55
CIITAP33076 HMGB1P26-201ENST00000452520 628 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.35□□□□□ -1.55
CIITAP33076 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.35□□□□□ -1.55
CIITAP33076 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 AC007686.1-201ENST00000488511 463 ntBASIC5.35□□□□□ -1.55
CIITAP33076 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.35□□□□□ -1.55
CIITAP33076 AP001207.2-201ENST00000519490 539 ntBASIC5.35□□□□□ -1.55
CIITAP33076 OR8G5-201ENST00000524943 1041 ntBASIC5.35□□□□□ -1.55
CIITAP33076 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.35□□□□□ -1.55
CIITAP33076 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.35□□□□□ -1.55
CIITAP33076 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.35□□□□□ -1.55
CIITAP33076 AC137768.1-201ENST00000549998 553 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.35□□□□□ -1.55
CIITAP33076 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.35□□□□□ -1.55
CIITAP33076 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.35□□□□□ -1.55
CIITAP33076 MTCO2P2-201ENST00000591258 225 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AC073137.1-201ENST00000605636 634 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.35□□□□□ -1.55
CIITAP33076 AL590396.4-201ENST00000636779 956 ntBASIC5.35□□□□□ -1.55
CIITAP33076 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.35□□□□□ -1.55
CIITAP33076 AL031119.1-201ENST00000404707 1879 ntBASIC5.34□□□□□ -1.55
CIITAP33076 MAPK10-263ENST00000641052 4307 ntBASIC5.34□□□□□ -1.55
CIITAP33076 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CIITAP33076 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.34□□□□□ -1.55
CIITAP33076 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CIITAP33076 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CIITAP33076 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CIITAP33076 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.34□□□□□ -1.55
CIITAP33076 SNORA70F-201ENST00000384142 135 ntBASIC5.34□□□□□ -1.55
CIITAP33076 RNU6-31P-201ENST00000384388 108 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AL049697.2-201ENST00000403708 294 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AL355615.1-201ENST00000406187 641 ntBASIC5.34□□□□□ -1.55
CIITAP33076 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.34□□□□□ -1.55
CIITAP33076 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.34□□□□□ -1.55
CIITAP33076 RN7SKP267-201ENST00000410381 285 ntBASIC5.34□□□□□ -1.55
CIITAP33076 RNU2-50P-201ENST00000410494 143 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CIITAP33076 AC019050.1-201ENST00000418508 492 ntBASIC5.34□□□□□ -1.55
CIITAP33076 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.34□□□□□ -1.55
CIITAP33076 CACYBPP1-201ENST00000438592 684 ntBASIC5.34□□□□□ -1.55
CIITAP33076 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.34□□□□□ -1.55
CIITAP33076 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.34□□□□□ -1.55
CIITAP33076 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.34□□□□□ -1.55
CIITAP33076 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.34□□□□□ -1.55
CIITAP33076 H2AFZP5-201ENST00000446960 382 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.34□□□□□ -1.55
CIITAP33076 EXOSC3P1-201ENST00000448649 500 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC073264.2-201ENST00000448886 166 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC002553.2-201ENST00000453217 340 ntBASIC5.34□□□□□ -1.55
CIITAP33076 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CIITAP33076 RPS4XP12-201ENST00000461747 709 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC069304.1-201ENST00000491593 704 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC025164.1-201ENST00000496249 478 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.34□□□□□ -1.55
CIITAP33076 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.34□□□□□ -1.55
CIITAP33076 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.34□□□□□ -1.55
CIITAP33076 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC010376.1-201ENST00000522101 334 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AP006289.1-201ENST00000538089 277 ntBASIC5.34□□□□□ -1.55
CIITAP33076 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CIITAP33076 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.34□□□□□ -1.55
CIITAP33076 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.34□□□□□ -1.55
CIITAP33076 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CIITAP33076 AC087477.6-201ENST00000559595 843 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC090888.2-201ENST00000559765 1144 ntBASIC5.34□□□□□ -1.55
CIITAP33076 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.34□□□□□ -1.55
CIITAP33076 MIR4509-3-201ENST00000578671 94 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC124283.4-201ENST00000581815 456 ntBASIC5.34□□□□□ -1.55
CIITAP33076 MIR4509-2-201ENST00000583920 94 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.34□□□□□ -1.55
CIITAP33076 MIR4509-1-201ENST00000618224 94 ntBASIC5.34□□□□□ -1.55
CIITAP33076 AC006963.1-201ENST00000624003 1052 ntBASIC5.34□□□□□ -1.55
CIITAP33076 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.34□□□□□ -1.55
CIITAP33076 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.34□□□□□ -1.55
CIITAP33076 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.34□□□□□ -1.55
CIITAP33076 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CIITAP33076 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.34□□□□□ -1.56
CIITAP33076 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CIITAP33076 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CIITAP33076 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.34□□□□□ -1.56
CIITAP33076 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
CIITAP33076 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.33□□□□□ -1.56
CIITAP33076 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CIITAP33076 ZNF90P1-201ENST00000480493 1951 ntBASIC5.33□□□□□ -1.56
CIITAP33076 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CIITAP33076 HSPA8P17-201ENST00000427029 1382 ntBASIC5.33□□□□□ -1.56
CIITAP33076 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CIITAP33076 SEPT7P7-201ENST00000420492 1301 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms