Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC018552.1-201ENST00000562099 811 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 MIR3913-1-201ENST00000577744 102 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 MIR5697-201ENST00000578045 78 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXC12P31275 AC112187.2-201ENST00000604345 283 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AC139493.1-201ENST00000604368 397 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AC091304.9-201ENST00000612091 226 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC12P31275 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HOXC12P31275 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC12P31275 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC12P31275 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC009120.2-204ENST00000621548 2032 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 SAGE3P-201ENST00000619800 1635 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 OR4G11P-202ENST00000642116 1414 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC105114.1-201ENST00000624795 1862 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
HOXC12P31275 CR848007.1-201ENST00000442354 1699 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC134882.1-201ENST00000603738 1676 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXC12P31275 SNORD16-201ENST00000362803 99 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 SNORD115-47-201ENST00000391226 86 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 PEX12P1-201ENST00000400284 1048 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AL121972.1-201ENST00000402023 252 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC12P31275 GLRXP1-201ENST00000423261 334 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC12P31275 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 RPL12P16-201ENST00000431098 498 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 RPL37P1-201ENST00000432310 284 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 ACTR3P2-201ENST00000439585 1257 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC12P31275 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 WASF1P1-201ENST00000447560 1131 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 CFL1P4-201ENST00000451536 498 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC092757.1-201ENST00000467293 467 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC017015.1-201ENST00000477387 286 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC022415.1-202ENST00000486612 523 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC006499.2-201ENST00000513470 337 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 COX6B1P4-201ENST00000519826 484 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 IGHV1-14-201ENST00000523391 241 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 AC013828.2-201ENST00000532487 235 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC12P31275 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 SNORA59B-202ENST00000578183 701 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 MIR4443-201ENST00000585052 53 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 AC104785.1-201ENST00000603220 588 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 BNIP3P11-201ENST00000603878 563 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC097467.4-201ENST00000605504 141 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AL513218.1-201ENST00000606527 391 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC12P31275 AC097468.3-201ENST00000607956 456 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AC108479.2-201ENST00000617314 601 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AL356321.1-201ENST00000621360 228 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC12P31275 CR392039.4-201ENST00000624968 501 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms