Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.81□□□□□ -1.64
ABCD3P28288 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.81□□□□□ -1.64
ABCD3P28288 BX323046.1-201ENST00000610145 535 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AL592148.2-201ENST00000612210 372 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC105227.2-201ENST00000615075 605 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC010975.3-201ENST00000618727 978 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 AC004232.3-201ENST00000622977 525 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.81□□□□□ -1.64
ABCD3P28288 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.81□□□□□ -1.64
ABCD3P28288 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 AC104118.1-201ENST00000607625 1589 ntBASIC4.81□□□□□ -1.64
ABCD3P28288 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
ABCD3P28288 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCD3P28288 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.81□□□□□ -1.64
ABCD3P28288 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCD3P28288 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ABCD3P28288 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
ABCD3P28288 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ABCD3P28288 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 AC011755.1-201ENST00000623763 2049 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 DBF4P1-201ENST00000412976 1892 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 C4BPAP1-201ENST00000415474 1893 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 MIR1182-201ENST00000408363 97 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 RNU6-575P-201ENST00000411326 105 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 Z75741.2-201ENST00000417272 1167 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 RPF2P1-201ENST00000424137 906 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 RPL30P3-201ENST00000424262 333 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 USP9YP24-201ENST00000434374 697 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 USP9YP17-201ENST00000444617 696 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 HMGB3P21-201ENST00000452483 547 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 RN7SL799P-201ENST00000475891 298 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 RN7SL727P-201ENST00000482164 296 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 SNRPCP2-201ENST00000504370 475 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.8□□□□□ -1.64
ABCD3P28288 HAUS8P1-201ENST00000549005 542 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 AL132857.1-201ENST00000555180 708 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.8□□□□□ -1.64
ABCD3P28288 OR11J2P-201ENST00000555298 907 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC069304.3-201ENST00000603938 1084 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 AP005137.2-201ENST00000609238 400 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 AC118658.2-201ENST00000618697 459 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCD3P28288 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.8□□□□□ -1.64
ABCD3P28288 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.8□□□□□ -1.64
ABCD3P28288 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 AC073136.1-201ENST00000449426 2884 ntBASIC4.8□□□□□ -1.64
ABCD3P28288 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
ABCD3P28288 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCD3P28288 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ABCD3P28288 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ABCD3P28288 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ABCD3P28288 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ABCD3P28288 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ABCD3P28288 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ABCD3P28288 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.79□□□□□ -1.64
ABCD3P28288 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.79□□□□□ -1.64
ABCD3P28288 AC000367.1-201ENST00000452711 1766 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms