Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 AC100827.5-201ENST00000615883 426 ntBASIC5.29□□□□□ -1.56
BDNFP23560 AC091953.3-201ENST00000623220 236 ntBASIC5.29□□□□□ -1.56
BDNFP23560 AC097372.4-201ENST00000625025 466 ntBASIC5.29□□□□□ -1.56
BDNFP23560 MIR4496-201ENST00000635896 61 ntBASIC5.29□□□□□ -1.56
BDNFP23560 FAM157B-203ENST00000639350 358 ntBASIC5.29□□□□□ -1.56
BDNFP23560 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
BDNFP23560 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
BDNFP23560 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.29□□□□□ -1.56
BDNFP23560 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 AL672167.1-205ENST00000641112 3080 ntBASIC5.29□□□□□ -1.56
BDNFP23560 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 MTCO1P6-201ENST00000481192 1384 ntBASIC5.29□□□□□ -1.56
BDNFP23560 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BDNFP23560 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BDNFP23560 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
BDNFP23560 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BDNFP23560 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
BDNFP23560 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BDNFP23560 U3.32-201ENST00000408116 212 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AC004987.3-201ENST00000413879 771 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AL139128.1-201ENST00000413921 941 ntBASIC5.28□□□□□ -1.56
BDNFP23560 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.28□□□□□ -1.56
BDNFP23560 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.28□□□□□ -1.56
BDNFP23560 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 RPL7P11-201ENST00000437586 658 ntBASIC5.28□□□□□ -1.56
BDNFP23560 TXNP5-201ENST00000441043 315 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.28□□□□□ -1.56
BDNFP23560 MRPL35P4-201ENST00000453682 566 ntBASIC5.28□□□□□ -1.56
BDNFP23560 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.28□□□□□ -1.56
BDNFP23560 AC007688.1-201ENST00000475592 759 ntBASIC5.28□□□□□ -1.56
BDNFP23560 RN7SL441P-201ENST00000492388 296 ntBASIC5.28□□□□□ -1.56
BDNFP23560 TPT1P3-201ENST00000492841 512 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.28□□□□□ -1.56
BDNFP23560 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 NIFKP7-201ENST00000503365 834 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.28□□□□□ -1.56
BDNFP23560 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.28□□□□□ -1.56
BDNFP23560 AC090071.1-201ENST00000507713 644 ntBASIC5.28□□□□□ -1.56
BDNFP23560 RNA5SP497-201ENST00000516081 97 ntBASIC5.28□□□□□ -1.56
BDNFP23560 RN7SKP234-201ENST00000517173 224 ntBASIC5.28□□□□□ -1.56
BDNFP23560 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.28□□□□□ -1.56
BDNFP23560 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.28□□□□□ -1.56
BDNFP23560 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 AC124283.4-201ENST00000581815 456 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.28□□□□□ -1.56
BDNFP23560 VN1R88P-201ENST00000596787 292 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AC083899.3-201ENST00000603413 594 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AC091488.1-201ENST00000604239 660 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AC116651.1-201ENST00000609724 556 ntBASIC5.28□□□□□ -1.56
BDNFP23560 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.28□□□□□ -1.56
BDNFP23560 AC006213.5-201ENST00000619673 288 ntBASIC5.28□□□□□ -1.56
BDNFP23560 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BDNFP23560 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
BDNFP23560 AC025031.4-201ENST00000621248 3271 ntBASIC5.28□□□□□ -1.56
BDNFP23560 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
BDNFP23560 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
BDNFP23560 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.28□□□□□ -1.56
BDNFP23560 AL512283.1-201ENST00000606756 1384 ntBASIC5.28□□□□□ -1.56
BDNFP23560 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BDNFP23560 MUC2-202ENST00000613187 4845 ntBASIC5.27□□□□□ -1.57
BDNFP23560 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BDNFP23560 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
BDNFP23560 RN7SKP149-201ENST00000363008 344 ntBASIC5.27□□□□□ -1.57
BDNFP23560 AC007618.1-201ENST00000366455 732 ntBASIC5.27□□□□□ -1.57
BDNFP23560 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.27□□□□□ -1.57
BDNFP23560 RNU6-356P-201ENST00000384140 107 ntBASIC5.27□□□□□ -1.57
BDNFP23560 MIR585-201ENST00000384887 94 ntBASIC5.27□□□□□ -1.57
BDNFP23560 RNU4-27P-201ENST00000410889 139 ntBASIC5.27□□□□□ -1.57
BDNFP23560 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.27□□□□□ -1.57
BDNFP23560 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.27□□□□□ -1.57
BDNFP23560 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.27□□□□□ -1.57
BDNFP23560 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.27□□□□□ -1.57
BDNFP23560 AC006466.1-201ENST00000438721 289 ntBASIC5.27□□□□□ -1.57
BDNFP23560 AC002542.1-201ENST00000440683 193 ntBASIC5.27□□□□□ -1.57
BDNFP23560 AC073648.4-201ENST00000442655 781 ntBASIC5.27□□□□□ -1.57
BDNFP23560 Z80107.2-201ENST00000445127 392 ntBASIC5.27□□□□□ -1.57
BDNFP23560 AC233982.1-201ENST00000451247 436 ntBASIC5.27□□□□□ -1.57
BDNFP23560 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.27□□□□□ -1.57
BDNFP23560 CBX1P2-201ENST00000453841 458 ntBASIC5.27□□□□□ -1.57
BDNFP23560 AC008280.2-201ENST00000455473 307 ntBASIC5.27□□□□□ -1.57
BDNFP23560 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
BDNFP23560 AC105233.1-201ENST00000498840 781 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms