Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.11□□□□□ -1.27
RFX1P22670 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.11□□□□□ -1.27
RFX1P22670 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RFX1P22670 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.1□□□□□ -1.27
RFX1P22670 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.1□□□□□ -1.27
RFX1P22670 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RFX1P22670 MTND4P12-201ENST00000498999 1377 ntBASIC7.1□□□□□ -1.27
RFX1P22670 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.1□□□□□ -1.27
RFX1P22670 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RFX1P22670 AC011455.2-201ENST00000599320 3336 ntBASIC7.1□□□□□ -1.27
RFX1P22670 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.1□□□□□ -1.27
RFX1P22670 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
RFX1P22670 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 U8.3-201ENST00000363321 132 ntBASIC7.1□□□□□ -1.27
RFX1P22670 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.1□□□□□ -1.27
RFX1P22670 RNU6-780P-201ENST00000391030 104 ntBASIC7.1□□□□□ -1.27
RFX1P22670 RNU6-876P-201ENST00000391295 104 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.1□□□□□ -1.27
RFX1P22670 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.1□□□□□ -1.27
RFX1P22670 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.1□□□□□ -1.27
RFX1P22670 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 AL358934.1-201ENST00000432346 324 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AC003989.1-201ENST00000434569 565 ntBASIC7.1□□□□□ -1.27
RFX1P22670 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.1□□□□□ -1.27
RFX1P22670 HMGN1P2-201ENST00000445197 310 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC7.1□□□□□ -1.27
RFX1P22670 AC092001.1-201ENST00000453012 261 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AMD1P1-201ENST00000457220 922 ntBASIC7.1□□□□□ -1.27
RFX1P22670 RPL31P50-201ENST00000471002 296 ntBASIC7.1□□□□□ -1.27
RFX1P22670 RPL7AP10-201ENST00000481016 791 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC7.1□□□□□ -1.27
RFX1P22670 MTCYBP18-201ENST00000501056 747 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AC008628.2-201ENST00000502605 298 ntBASIC7.1□□□□□ -1.27
RFX1P22670 TMEM251P1-201ENST00000503717 318 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.1□□□□□ -1.27
RFX1P22670 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.1□□□□□ -1.27
RFX1P22670 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.1□□□□□ -1.27
RFX1P22670 RNU6-358P-201ENST00000516564 75 ntBASIC7.1□□□□□ -1.27
RFX1P22670 RNU2-46P-201ENST00000517038 113 ntBASIC7.1□□□□□ -1.27
RFX1P22670 COX6CP8-201ENST00000522620 226 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC7.1□□□□□ -1.27
RFX1P22670 CYCSP28-201ENST00000534284 321 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AK6P1-201ENST00000540219 478 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AL845552.1-201ENST00000556820 323 ntBASIC7.1□□□□□ -1.27
RFX1P22670 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC7.1□□□□□ -1.27
RFX1P22670 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.1□□□□□ -1.27
RFX1P22670 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RFX1P22670 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RFX1P22670 AC008752.3-201ENST00000588113 712 ntBASIC7.1□□□□□ -1.27
RFX1P22670 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC7.1□□□□□ -1.27
RFX1P22670 AC007363.1-201ENST00000604736 620 ntBASIC7.1□□□□□ -1.27
RFX1P22670 TUG1_1.1-201ENST00000610654 145 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AC079395.2-201ENST00000610982 737 ntBASIC7.1□□□□□ -1.27
RFX1P22670 TCL6_3.1-201ENST00000619064 137 ntBASIC7.1□□□□□ -1.27
RFX1P22670 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.1□□□□□ -1.27
RFX1P22670 AC004009.2-201ENST00000623016 728 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AC061999.1-201ENST00000624454 177 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AC110994.2-201ENST00000635481 492 ntBASIC7.1□□□□□ -1.27
RFX1P22670 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.1□□□□□ -1.27
RFX1P22670 AC010325.3-201ENST00000641084 394 ntBASIC7.1□□□□□ -1.27
RFX1P22670 OR2L1P-202ENST00000641567 1023 ntBASIC7.1□□□□□ -1.27
RFX1P22670 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.1□□□□□ -1.27
RFX1P22670 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RFX1P22670 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 XPOTP1-201ENST00000443317 2398 ntBASIC7.1□□□□□ -1.27
RFX1P22670 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 AP002907.1-201ENST00000606361 1430 ntBASIC7.1□□□□□ -1.27
RFX1P22670 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RFX1P22670 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RFX1P22670 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.09□□□□□ -1.27
RFX1P22670 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RFX1P22670 CASC19-280ENST00000642102 1351 ntBASIC7.09□□□□□ -1.27
RFX1P22670 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RFX1P22670 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RFX1P22670 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.09□□□□□ -1.27
RFX1P22670 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RFX1P22670 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RFX1P22670 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC7.09□□□□□ -1.27
RFX1P22670 Y_RNA.61-201ENST00000362835 102 ntBASIC7.09□□□□□ -1.27
RFX1P22670 Y_RNA.813-201ENST00000364639 102 ntBASIC7.09□□□□□ -1.27
RFX1P22670 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RFX1P22670 RNU6-952P-201ENST00000391164 108 ntBASIC7.09□□□□□ -1.27
RFX1P22670 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RFX1P22670 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.09□□□□□ -1.27
RFX1P22670 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RFX1P22670 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.09□□□□□ -1.27
RFX1P22670 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.09□□□□□ -1.27
RFX1P22670 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.09□□□□□ -1.27
RFX1P22670 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC7.09□□□□□ -1.27
RFX1P22670 AC004980.3-201ENST00000447046 365 ntBASIC7.09□□□□□ -1.27
RFX1P22670 TPT1P14-201ENST00000448018 505 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms