Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC104629.2-201ENST00000468627 598 ntBASIC3.9□□□□□ -1.79
USF1P22415 AC010618.1-201ENST00000469924 477 ntBASIC3.9□□□□□ -1.79
USF1P22415 AC104763.1-201ENST00000475274 360 ntBASIC3.9□□□□□ -1.79
USF1P22415 RPL23AP37-201ENST00000479658 549 ntBASIC3.9□□□□□ -1.79
USF1P22415 MTND4LP2-201ENST00000502312 285 ntBASIC3.9□□□□□ -1.79
USF1P22415 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
USF1P22415 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.9□□□□□ -1.79
USF1P22415 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.9□□□□□ -1.79
USF1P22415 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.9□□□□□ -1.79
USF1P22415 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
USF1P22415 KPNA2P3-201ENST00000584190 848 ntBASIC3.9□□□□□ -1.79
USF1P22415 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.9□□□□□ -1.79
USF1P22415 AC073137.1-201ENST00000605636 634 ntBASIC3.9□□□□□ -1.79
USF1P22415 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.9□□□□□ -1.79
USF1P22415 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.9□□□□□ -1.79
USF1P22415 OR52H1-202ENST00000641796 1061 ntBASIC3.9□□□□□ -1.79
USF1P22415 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
USF1P22415 RAD17P1-201ENST00000418130 2042 ntBASIC3.9□□□□□ -1.79
USF1P22415 AC025031.4-201ENST00000621248 3271 ntBASIC3.9□□□□□ -1.79
USF1P22415 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
USF1P22415 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USF1P22415 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
USF1P22415 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 AL133268.1-201ENST00000405676 1401 ntBASIC3.89□□□□□ -1.79
USF1P22415 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 AP000756.2-201ENST00000624168 2567 ntBASIC3.89□□□□□ -1.79
USF1P22415 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.89□□□□□ -1.79
USF1P22415 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
USF1P22415 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
USF1P22415 ST13P16-201ENST00000401760 781 ntBASIC3.89□□□□□ -1.79
USF1P22415 AL121834.1-202ENST00000404494 277 ntBASIC3.89□□□□□ -1.79
USF1P22415 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.89□□□□□ -1.79
USF1P22415 E2F6P2-201ENST00000420708 748 ntBASIC3.89□□□□□ -1.79
USF1P22415 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.89□□□□□ -1.79
USF1P22415 AC004975.1-201ENST00000428733 208 ntBASIC3.89□□□□□ -1.79
USF1P22415 ARL5AP3-201ENST00000439327 386 ntBASIC3.89□□□□□ -1.79
USF1P22415 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.89□□□□□ -1.79
USF1P22415 GEMIN8P3-201ENST00000445417 720 ntBASIC3.89□□□□□ -1.79
USF1P22415 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.89□□□□□ -1.79
USF1P22415 AL445433.1-201ENST00000457507 257 ntBASIC3.89□□□□□ -1.79
USF1P22415 RPL23AP24-201ENST00000458203 385 ntBASIC3.89□□□□□ -1.79
USF1P22415 AC108751.2-201ENST00000469993 231 ntBASIC3.89□□□□□ -1.79
USF1P22415 ATG10-AS1-201ENST00000504846 648 ntBASIC3.89□□□□□ -1.79
USF1P22415 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.89□□□□□ -1.79
USF1P22415 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.89□□□□□ -1.79
USF1P22415 AC007016.1-201ENST00000512110 244 ntBASIC3.89□□□□□ -1.79
USF1P22415 MTCYBP19-201ENST00000517463 1124 ntBASIC3.89□□□□□ -1.79
USF1P22415 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.89□□□□□ -1.79
USF1P22415 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.89□□□□□ -1.79
USF1P22415 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.89□□□□□ -1.79
USF1P22415 BNIP3P5-201ENST00000562290 498 ntBASIC3.89□□□□□ -1.79
USF1P22415 AC093249.4-201ENST00000564755 259 ntBASIC3.89□□□□□ -1.79
USF1P22415 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.89□□□□□ -1.79
USF1P22415 MTCO2P22-201ENST00000603246 681 ntBASIC3.89□□□□□ -1.79
USF1P22415 AC091979.2-201ENST00000607514 214 ntBASIC3.89□□□□□ -1.79
USF1P22415 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 AC009237.17-201ENST00000618111 748 ntBASIC3.89□□□□□ -1.79
USF1P22415 AL121890.3-201ENST00000618494 516 ntBASIC3.89□□□□□ -1.79
USF1P22415 AC068831.8-201ENST00000620171 435 ntBASIC3.89□□□□□ -1.79
USF1P22415 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USF1P22415 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
USF1P22415 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.89□□□□□ -1.79
USF1P22415 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.89□□□□□ -1.79
USF1P22415 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
USF1P22415 MAPK10-303ENST00000641324 3959 ntBASIC3.88□□□□□ -1.79
USF1P22415 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USF1P22415 OR51C1P-202ENST00000641159 1444 ntBASIC3.88□□□□□ -1.79
USF1P22415 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.88□□□□□ -1.79
USF1P22415 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USF1P22415 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.88□□□□□ -1.79
USF1P22415 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USF1P22415 OR4K17-201ENST00000315543 1032 ntBASIC3.88□□□□□ -1.79
USF1P22415 RNU1-94P-201ENST00000362627 173 ntBASIC3.88□□□□□ -1.79
USF1P22415 RNU6-618P-201ENST00000363518 112 ntBASIC3.88□□□□□ -1.79
USF1P22415 LAP3P1-201ENST00000403648 294 ntBASIC3.88□□□□□ -1.79
USF1P22415 AL592291.1-201ENST00000403830 352 ntBASIC3.88□□□□□ -1.79
USF1P22415 MIR1193-201ENST00000408109 78 ntBASIC3.88□□□□□ -1.79
USF1P22415 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.88□□□□□ -1.79
USF1P22415 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.88□□□□□ -1.79
USF1P22415 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USF1P22415 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.88□□□□□ -1.79
USF1P22415 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.88□□□□□ -1.79
USF1P22415 AC011998.1-201ENST00000433403 117 ntBASIC3.88□□□□□ -1.79
USF1P22415 AL353597.2-202ENST00000434901 373 ntBASIC3.88□□□□□ -1.79
USF1P22415 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.88□□□□□ -1.79
USF1P22415 MTCYBP21-201ENST00000443300 1113 ntBASIC3.88□□□□□ -1.79
USF1P22415 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USF1P22415 VN1R48P-201ENST00000448149 1036 ntBASIC3.88□□□□□ -1.79
USF1P22415 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.88□□□□□ -1.79
USF1P22415 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms