Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.08□□□□□ -1.76
COL5A1P20908 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL5A1P20908 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL5A1P20908 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL5A1P20908 MIR634-201ENST00000385208 97 ntBASIC4.08□□□□□ -1.76
COL5A1P20908 AL035246.1-201ENST00000433554 1255 ntBASIC4.08□□□□□ -1.76
COL5A1P20908 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A1P20908 AL500522.2-201ENST00000448562 343 ntBASIC4.08□□□□□ -1.76
COL5A1P20908 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL5A1P20908 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.08□□□□□ -1.76
COL5A1P20908 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
COL5A1P20908 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A1P20908 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.08□□□□□ -1.76
COL5A1P20908 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A1P20908 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.08□□□□□ -1.76
COL5A1P20908 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.08□□□□□ -1.76
COL5A1P20908 CASC19-261ENST00000641853 1638 ntBASIC4.08□□□□□ -1.76
COL5A1P20908 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
COL5A1P20908 EOGT-210ENST00000615922 1931 ntBASIC4.08□□□□□ -1.76
COL5A1P20908 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.08□□□□□ -1.76
COL5A1P20908 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
COL5A1P20908 AC023632.6-201ENST00000624338 2177 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A1P20908 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
COL5A1P20908 AC004448.2-201ENST00000422360 586 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 REREP1Y-201ENST00000422655 198 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 REREP2Y-201ENST00000439103 200 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 SERPINA7P1-201ENST00000443077 631 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AL157884.3-201ENST00000448273 1184 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AC010460.1-201ENST00000507087 466 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.07□□□□□ -1.76
COL5A1P20908 NPM1P21-201ENST00000513394 762 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AC103968.1-201ENST00000557841 573 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 AL121772.2-201ENST00000614331 297 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AC140113.4-201ENST00000622087 222 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.07□□□□□ -1.76
COL5A1P20908 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.07□□□□□ -1.76
COL5A1P20908 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A1P20908 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A1P20908 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A1P20908 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.07□□□□□ -1.76
COL5A1P20908 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.07□□□□□ -1.76
COL5A1P20908 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A1P20908 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A1P20908 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A1P20908 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.07□□□□□ -1.76
COL5A1P20908 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL5A1P20908 AL078604.1-201ENST00000404609 466 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 RPS26P2-201ENST00000440331 348 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.07□□□□□ -1.76
COL5A1P20908 RPL38P1-201ENST00000460914 211 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.07□□□□□ -1.76
COL5A1P20908 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.07□□□□□ -1.76
COL5A1P20908 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.07□□□□□ -1.76
COL5A1P20908 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.07□□□□□ -1.76
COL5A1P20908 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 AC022146.1-201ENST00000595307 847 ntBASIC4.07□□□□□ -1.76
COL5A1P20908 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.07□□□□□ -1.76
COL5A1P20908 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
COL5A1P20908 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.06□□□□□ -1.76
COL5A1P20908 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.06□□□□□ -1.76
COL5A1P20908 AC116667.1-201ENST00000604855 2072 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
COL5A1P20908 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.06□□□□□ -1.76
COL5A1P20908 RNU11-4P-201ENST00000391149 133 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.06□□□□□ -1.76
COL5A1P20908 SETP9-201ENST00000423837 832 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.06□□□□□ -1.76
COL5A1P20908 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 AC022336.1-201ENST00000475510 337 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.06□□□□□ -1.76
COL5A1P20908 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.06□□□□□ -1.76
COL5A1P20908 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.06□□□□□ -1.76
COL5A1P20908 AC008966.2-201ENST00000606157 453 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 SNORA51-201ENST00000606420 132 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 OR2BH1P-201ENST00000608850 864 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 AC099669.2-201ENST00000616549 437 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 MIR6500-201ENST00000622700 86 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 AC020978.9-201ENST00000624380 1141 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 AC126323.6-202ENST00000568092 3511 ntBASIC4.06□□□□□ -1.76
COL5A1P20908 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL5A1P20908 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms