Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC1P18827 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.2□□□□□ -1.74
SDC1P18827 RPL7AP28-201ENST00000464513 571 ntBASIC4.2□□□□□ -1.74
SDC1P18827 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.2□□□□□ -1.74
SDC1P18827 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.2□□□□□ -1.74
SDC1P18827 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC1P18827 HIGD1AP18-201ENST00000520730 278 ntBASIC4.2□□□□□ -1.74
SDC1P18827 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC1P18827 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SDC1P18827 GLRXP2-201ENST00000555594 321 ntBASIC4.2□□□□□ -1.74
SDC1P18827 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC1P18827 AP005119.2-201ENST00000579735 1105 ntBASIC4.2□□□□□ -1.74
SDC1P18827 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC1P18827 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.2□□□□□ -1.74
SDC1P18827 AC068790.7-201ENST00000602347 528 ntBASIC4.2□□□□□ -1.74
SDC1P18827 OR4H6P-202ENST00000603819 340 ntBASIC4.2□□□□□ -1.74
SDC1P18827 AC013244.1-201ENST00000604279 193 ntBASIC4.2□□□□□ -1.74
SDC1P18827 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC1P18827 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.2□□□□□ -1.74
SDC1P18827 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.2□□□□□ -1.74
SDC1P18827 AC091953.3-201ENST00000623220 236 ntBASIC4.2□□□□□ -1.74
SDC1P18827 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.2□□□□□ -1.74
SDC1P18827 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.2□□□□□ -1.74
SDC1P18827 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SDC1P18827 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.2□□□□□ -1.74
SDC1P18827 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SDC1P18827 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SDC1P18827 AC005332.5-201ENST00000591222 2919 ntBASIC4.19□□□□□ -1.74
SDC1P18827 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.19□□□□□ -1.74
SDC1P18827 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC1P18827 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.19□□□□□ -1.74
SDC1P18827 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
SDC1P18827 SNORD115-48-201ENST00000364764 76 ntBASIC4.19□□□□□ -1.74
SDC1P18827 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC1P18827 GLULP6-201ENST00000399502 913 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AL121834.1-202ENST00000404494 277 ntBASIC4.19□□□□□ -1.74
SDC1P18827 SNRPFP1-201ENST00000414761 252 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AL590762.4-201ENST00000425885 253 ntBASIC4.19□□□□□ -1.74
SDC1P18827 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.19□□□□□ -1.74
SDC1P18827 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC1P18827 ZNF965P-201ENST00000432501 817 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AC114495.1-201ENST00000441274 436 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AC011753.3-201ENST00000443436 406 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC1P18827 AC017099.1-201ENST00000448261 1028 ntBASIC4.19□□□□□ -1.74
SDC1P18827 ABCF2P2-201ENST00000450549 296 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC1P18827 AC021205.1-201ENST00000468797 348 ntBASIC4.19□□□□□ -1.74
SDC1P18827 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC1P18827 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC1P18827 SUMO1P1-201ENST00000497904 306 ntBASIC4.19□□□□□ -1.74
SDC1P18827 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SDC1P18827 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SDC1P18827 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SDC1P18827 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC1P18827 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC1P18827 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC1P18827 DYNLL1P4-201ENST00000549314 266 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AC124068.1-201ENST00000563131 678 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.19□□□□□ -1.74
SDC1P18827 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.19□□□□□ -1.74
SDC1P18827 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.19□□□□□ -1.74
SDC1P18827 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.19□□□□□ -1.74
SDC1P18827 AC100847.1-201ENST00000611316 481 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.19□□□□□ -1.74
SDC1P18827 LINC00901.1-201ENST00000617252 152 ntBASIC4.19□□□□□ -1.74
SDC1P18827 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.19□□□□□ -1.74
SDC1P18827 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.19□□□□□ -1.74
SDC1P18827 AL049536.1-201ENST00000625043 744 ntBASIC4.19□□□□□ -1.74
SDC1P18827 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SDC1P18827 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SDC1P18827 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SDC1P18827 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SDC1P18827 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SDC1P18827 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SDC1P18827 AL359715.4-201ENST00000606629 1436 ntBASIC4.19□□□□□ -1.74
SDC1P18827 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC1P18827 AC091046.3-201ENST00000631455 1574 ntBASIC4.19□□□□□ -1.74
SDC1P18827 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.18□□□□□ -1.74
SDC1P18827 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SDC1P18827 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDC1P18827 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDC1P18827 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.18□□□□□ -1.74
SDC1P18827 RNU1-130P-201ENST00000363930 160 ntBASIC4.18□□□□□ -1.74
SDC1P18827 MIR550A3-201ENST00000390735 95 ntBASIC4.18□□□□□ -1.74
SDC1P18827 RNU6-244P-201ENST00000391028 104 ntBASIC4.18□□□□□ -1.74
SDC1P18827 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.18□□□□□ -1.74
SDC1P18827 AC019070.1-201ENST00000415008 1024 ntBASIC4.18□□□□□ -1.74
SDC1P18827 AC073464.3-201ENST00000422564 712 ntBASIC4.18□□□□□ -1.74
SDC1P18827 OR6K4P-201ENST00000423179 955 ntBASIC4.18□□□□□ -1.74
SDC1P18827 RPL7AP25-201ENST00000423357 805 ntBASIC4.18□□□□□ -1.74
SDC1P18827 GTF2IP2-201ENST00000424290 697 ntBASIC4.18□□□□□ -1.74
SDC1P18827 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.18□□□□□ -1.74
SDC1P18827 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SDC1P18827 MTND4P15-201ENST00000437913 1033 ntBASIC4.18□□□□□ -1.74
SDC1P18827 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.18□□□□□ -1.74
SDC1P18827 AC096741.1-201ENST00000472250 846 ntBASIC4.18□□□□□ -1.74
SDC1P18827 RN7SL826P-201ENST00000479724 288 ntBASIC4.18□□□□□ -1.74
SDC1P18827 OR9N1P-202ENST00000494289 481 ntBASIC4.18□□□□□ -1.74
SDC1P18827 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms