Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.1□□□□□ -1.43
SYN1P17600 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
SYN1P17600 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 Y_RNA.359-201ENST00000365498 102 ntBASIC6.1□□□□□ -1.43
SYN1P17600 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SYN1P17600 MIR551A-201ENST00000385042 96 ntBASIC6.1□□□□□ -1.43
SYN1P17600 U3.28-201ENST00000391249 210 ntBASIC6.1□□□□□ -1.43
SYN1P17600 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 ATF1P1-201ENST00000406040 927 ntBASIC6.1□□□□□ -1.43
SYN1P17600 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.1□□□□□ -1.43
SYN1P17600 USP9YP35-201ENST00000435696 412 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AC000041.1-201ENST00000439655 175 ntBASIC6.1□□□□□ -1.43
SYN1P17600 HMGB1P5-202ENST00000451497 985 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.1□□□□□ -1.43
SYN1P17600 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.1□□□□□ -1.43
SYN1P17600 AC008280.2-201ENST00000455473 307 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AC096741.1-201ENST00000472250 846 ntBASIC6.1□□□□□ -1.43
SYN1P17600 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.1□□□□□ -1.43
SYN1P17600 RN7SL165P-201ENST00000477476 291 ntBASIC6.1□□□□□ -1.43
SYN1P17600 MYL12BP2-201ENST00000503948 512 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AC079140.3-201ENST00000511111 550 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AC108120.2-201ENST00000512973 294 ntBASIC6.1□□□□□ -1.43
SYN1P17600 MTCYBP19-201ENST00000517463 1124 ntBASIC6.1□□□□□ -1.43
SYN1P17600 DUXAP2-201ENST00000519198 589 ntBASIC6.1□□□□□ -1.43
SYN1P17600 C1GALT1P3-201ENST00000522049 819 ntBASIC6.1□□□□□ -1.43
SYN1P17600 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
SYN1P17600 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.1□□□□□ -1.43
SYN1P17600 AP002963.1-201ENST00000530590 184 ntBASIC6.1□□□□□ -1.43
SYN1P17600 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.1□□□□□ -1.43
SYN1P17600 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.1□□□□□ -1.43
SYN1P17600 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.1□□□□□ -1.43
SYN1P17600 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.1□□□□□ -1.43
SYN1P17600 AC074051.3-201ENST00000570238 358 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AC087683.1-201ENST00000591187 441 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.1□□□□□ -1.43
SYN1P17600 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.1□□□□□ -1.43
SYN1P17600 AC009994.1-201ENST00000606889 253 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AL451074.6-201ENST00000608512 729 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AP000255.1-201ENST00000610276 676 ntBASIC6.1□□□□□ -1.43
SYN1P17600 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 AC122133.1-201ENST00000613964 233 ntBASIC6.1□□□□□ -1.43
SYN1P17600 AC010678.1-201ENST00000614118 713 ntBASIC6.1□□□□□ -1.43
SYN1P17600 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.1□□□□□ -1.43
SYN1P17600 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.1□□□□□ -1.43
SYN1P17600 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.1□□□□□ -1.43
SYN1P17600 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.1□□□□□ -1.43
SYN1P17600 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYN1P17600 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SYN1P17600 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYN1P17600 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.09□□□□□ -1.43
SYN1P17600 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYN1P17600 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SYN1P17600 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.09□□□□□ -1.43
SYN1P17600 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYN1P17600 RNU6-398P-201ENST00000384143 109 ntBASIC6.09□□□□□ -1.43
SYN1P17600 RNA5SP105-201ENST00000391123 113 ntBASIC6.09□□□□□ -1.43
SYN1P17600 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.09□□□□□ -1.43
SYN1P17600 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.09□□□□□ -1.43
SYN1P17600 AL590139.1-201ENST00000416267 400 ntBASIC6.09□□□□□ -1.43
SYN1P17600 NPM1P11-201ENST00000417106 855 ntBASIC6.09□□□□□ -1.43
SYN1P17600 ELOCP9-201ENST00000418624 239 ntBASIC6.09□□□□□ -1.43
SYN1P17600 AC012519.1-201ENST00000424588 610 ntBASIC6.09□□□□□ -1.43
SYN1P17600 AL136231.1-201ENST00000429407 730 ntBASIC6.09□□□□□ -1.43
SYN1P17600 AC008072.1-201ENST00000434254 824 ntBASIC6.09□□□□□ -1.43
SYN1P17600 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.09□□□□□ -1.43
SYN1P17600 AC092641.1-201ENST00000440229 772 ntBASIC6.09□□□□□ -1.43
SYN1P17600 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.09□□□□□ -1.43
SYN1P17600 AC012512.1-201ENST00000446594 718 ntBASIC6.09□□□□□ -1.43
SYN1P17600 MTND1P18-201ENST00000448191 573 ntBASIC6.09□□□□□ -1.43
SYN1P17600 AC093392.2-201ENST00000450682 337 ntBASIC6.09□□□□□ -1.43
SYN1P17600 AC005410.1-202ENST00000460347 485 ntBASIC6.09□□□□□ -1.43
SYN1P17600 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.09□□□□□ -1.43
SYN1P17600 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYN1P17600 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.09□□□□□ -1.43
SYN1P17600 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.09□□□□□ -1.43
SYN1P17600 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.09□□□□□ -1.43
SYN1P17600 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYN1P17600 OR5AN2P-201ENST00000534535 896 ntBASIC6.09□□□□□ -1.43
SYN1P17600 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.09□□□□□ -1.43
SYN1P17600 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.09□□□□□ -1.43
SYN1P17600 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.09□□□□□ -1.43
SYN1P17600 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.09□□□□□ -1.43
SYN1P17600 AC079171.1-201ENST00000568788 914 ntBASIC6.09□□□□□ -1.43
SYN1P17600 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.09□□□□□ -1.43
SYN1P17600 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.09□□□□□ -1.43
SYN1P17600 AC069545.1-201ENST00000605671 358 ntBASIC6.09□□□□□ -1.43
SYN1P17600 AP003392.5-201ENST00000607857 415 ntBASIC6.09□□□□□ -1.43
SYN1P17600 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.09□□□□□ -1.43
SYN1P17600 AC025574.2-201ENST00000615621 514 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms