Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 USP9YP26-201ENST00000421008 661 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 OR2B7P-201ENST00000429302 934 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 KCTD10P1-201ENST00000434203 625 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 AL359265.2-201ENST00000434367 631 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 RPS27P5-201ENST00000444247 244 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 PRPF38AP1-201ENST00000451976 933 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 RPS5P7-201ENST00000456664 608 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 ENPP7P11-201ENST00000505915 627 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 AC010306.1-201ENST00000523223 1117 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 MTCO2P15-201ENST00000532655 656 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 AC011453.2-201ENST00000603737 729 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 AC104687.2-201ENST00000604442 342 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 AL022394.1-201ENST00000606979 292 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 AC010424.2-201ENST00000607594 443 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOAP06340 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOAP06340 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOAP06340 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOAP06340 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DOAP06340 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOAP06340 AC005261.4-201ENST00000600047 1385 ntBASIC5.78□□□□□ -1.48
HLA-DOAP06340 AP000641.1-201ENST00000531988 1639 ntBASIC5.77□□□□□ -1.48
HLA-DOAP06340 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.77□□□□□ -1.48
HLA-DOAP06340 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC008758.3-201ENST00000507003 1829 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 U3.30-201ENST00000391308 210 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC005154.2-201ENST00000438110 379 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 RPL36AP15-201ENST00000444514 266 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC009220.1-201ENST00000451614 275 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 ATG12P2-201ENST00000456830 416 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC128716.1-201ENST00000475129 166 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 RPS4XP6-201ENST00000477670 797 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC011037.1-201ENST00000483964 558 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AL049874.2-201ENST00000492636 288 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 CEACAMP10-202ENST00000495431 496 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC138409.2-202ENST00000507274 458 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 OR51K1P-201ENST00000510214 950 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 GSTP1P1-201ENST00000548078 319 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC023813.2-201ENST00000564321 469 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 MIR4789-201ENST00000577469 82 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC012254.4-201ENST00000588843 273 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC024060.1-201ENST00000607052 494 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 MIR6853-201ENST00000619642 74 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 MIR7703-201ENST00000620784 77 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 AC090897.3-201ENST00000636973 1157 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 OR9K1P-202ENST00000641111 3217 ntBASIC5.77□□□□□ -1.49
HLA-DOAP06340 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DOAP06340 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DOAP06340 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DOAP06340 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 RPL7P58-201ENST00000402913 758 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 RNU2-17P-201ENST00000410290 190 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 RNA5SP345-201ENST00000410646 108 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 RPL26P37-201ENST00000411983 438 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 RPS3AP37-201ENST00000419176 745 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms