Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SNORA37-201ENST00000384504 129 ntBASIC3.2□□□□□ -1.9
TCRAP04437 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TCRAP04437 RN7SKP56-201ENST00000410513 331 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRAP04437 MTND4LP21-201ENST00000415303 295 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AC019050.1-201ENST00000418508 492 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AC079355.1-201ENST00000421770 223 ntBASIC3.2□□□□□ -1.9
TCRAP04437 RPL12P34-201ENST00000424532 479 ntBASIC3.2□□□□□ -1.9
TCRAP04437 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TCRAP04437 AL356535.1-201ENST00000440335 398 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRAP04437 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.2□□□□□ -1.9
TCRAP04437 CLIC4P1-201ENST00000453177 535 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AC091685.2-201ENST00000454924 864 ntBASIC3.2□□□□□ -1.9
TCRAP04437 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
TCRAP04437 AC016687.1-201ENST00000482574 353 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AC069499.1-201ENST00000489433 509 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AC010374.1-201ENST00000503762 1237 ntBASIC3.2□□□□□ -1.9
TCRAP04437 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TCRAP04437 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.2□□□□□ -1.9
TCRAP04437 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.2□□□□□ -1.9
TCRAP04437 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRAP04437 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRAP04437 AC084757.1-201ENST00000559987 490 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.2□□□□□ -1.9
TCRAP04437 AC025946.2-201ENST00000603398 234 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AP003392.5-201ENST00000607857 415 ntBASIC3.2□□□□□ -1.9
TCRAP04437 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRAP04437 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRAP04437 AP005264.7-201ENST00000625003 745 ntBASIC3.2□□□□□ -1.9
TCRAP04437 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRAP04437 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRAP04437 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TCRAP04437 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TCRAP04437 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TCRAP04437 AC132825.1-201ENST00000463573 2247 ntBASIC3.2□□□□□ -1.9
TCRAP04437 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRAP04437 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TCRAP04437 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRAP04437 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TCRAP04437 C4BPAP1-201ENST00000415474 1893 ntBASIC3.2□□□□□ -1.9
TCRAP04437 BDP1P-201ENST00000582658 1990 ntBASIC3.2□□□□□ -1.9
TCRAP04437 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRAP04437 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TCRAP04437 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRAP04437 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRAP04437 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRAP04437 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
TCRAP04437 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TCRAP04437 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TCRAP04437 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRAP04437 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRAP04437 AC008033.1-201ENST00000216407 1162 ntBASIC3.19□□□□□ -1.9
TCRAP04437 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TCRAP04437 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TCRAP04437 AL589994.1-201ENST00000404962 340 ntBASIC3.19□□□□□ -1.9
TCRAP04437 RN7SKP106-201ENST00000410832 272 ntBASIC3.19□□□□□ -1.9
TCRAP04437 RPL23AP27-201ENST00000415161 451 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRAP04437 AL139095.3-201ENST00000419672 1203 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AL391219.1-201ENST00000422570 483 ntBASIC3.19□□□□□ -1.9
TCRAP04437 VDAC1P6-201ENST00000430062 855 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AC087650.1-201ENST00000431445 468 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AC011742.1-201ENST00000431448 434 ntBASIC3.19□□□□□ -1.9
TCRAP04437 YWHAQP9-201ENST00000445891 512 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRAP04437 AL645939.1-201ENST00000453429 797 ntBASIC3.19□□□□□ -1.9
TCRAP04437 RPL23AP81-201ENST00000455252 467 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRAP04437 MTND6P32-201ENST00000457611 483 ntBASIC3.19□□□□□ -1.9
TCRAP04437 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRAP04437 RPL7AP6-201ENST00000477943 801 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRAP04437 AC004815.1-201ENST00000484185 331 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AC093763.2-201ENST00000505334 1223 ntBASIC3.19□□□□□ -1.9
TCRAP04437 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.19□□□□□ -1.9
TCRAP04437 IGHV3-32-201ENST00000519182 355 ntBASIC3.19□□□□□ -1.9
TCRAP04437 IGLVIV-53-201ENST00000520107 367 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRAP04437 AC007599.1-201ENST00000568688 1174 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.19□□□□□ -1.9
TCRAP04437 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRAP04437 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.19□□□□□ -1.9
TCRAP04437 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRAP04437 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.19□□□□□ -1.9
TCRAP04437 AC020914.4-201ENST00000597690 277 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AC123786.2-201ENST00000603459 275 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AC104662.1-201ENST00000604448 511 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AL354984.3-201ENST00000604803 325 ntBASIC3.19□□□□□ -1.9
TCRAP04437 HMGB1P50-201ENST00000605814 607 ntBASIC3.19□□□□□ -1.9
TCRAP04437 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TCRAP04437 AC116447.1-201ENST00000613153 453 ntBASIC3.19□□□□□ -1.9
TCRAP04437 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRAP04437 AC095038.2-201ENST00000621464 1070 ntBASIC3.19□□□□□ -1.9
TCRAP04437 AC083899.2-201ENST00000423285 1376 ntBASIC3.19□□□□□ -1.9
TCRAP04437 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRAP04437 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRAP04437 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TCRAP04437 AP001486.2-201ENST00000561652 5113 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms