Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 MTND6P18-201ENST00000439477 513 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 UBE2V1P3-201ENST00000439651 417 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN9O95484 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN9O95484 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN9O95484 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN9O95484 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN9O95484 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN9O95484 RPS26P28-201ENST00000470806 348 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN9O95484 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN9O95484 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN9O95484 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN9O95484 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN9O95484 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN9O95484 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN9O95484 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN9O95484 AC123786.2-201ENST00000603459 275 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 LINC00901.1-201ENST00000617252 152 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLDN9O95484 AL049536.1-201ENST00000625043 744 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN9O95484 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CLDN9O95484 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN9O95484 DDX18P3-201ENST00000404856 2007 ntBASIC4.28□□□□□ -1.73
CLDN9O95484 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.28□□□□□ -1.73
CLDN9O95484 AC092079.1-201ENST00000558620 1985 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN9O95484 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CLDN9O95484 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLDN9O95484 RNU1-15P-201ENST00000353977 144 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN9O95484 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.27□□□□□ -1.73
CLDN9O95484 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN9O95484 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.27□□□□□ -1.73
CLDN9O95484 AC244453.4-201ENST00000419150 388 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AL691447.1-201ENST00000419456 387 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 UQCRBP1-201ENST00000421129 336 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 NDUFA5P10-201ENST00000432147 357 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN9O95484 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN9O95484 Z99127.2-201ENST00000441426 334 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AC011753.3-201ENST00000443436 406 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN9O95484 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN9O95484 AC021087.2-201ENST00000504656 1203 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 FABP5P6-201ENST00000510588 409 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN9O95484 AC015795.1-201ENST00000513669 327 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 HIGD1AP18-201ENST00000520730 278 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
CLDN9O95484 DYNLL1P4-201ENST00000549314 266 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AC074029.2-201ENST00000551045 634 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN9O95484 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.27□□□□□ -1.73
CLDN9O95484 AL121834.1-201ENST00000572284 509 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN9O95484 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN9O95484 AC100847.1-201ENST00000611316 481 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AC131238.1-201ENST00000617135 328 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 MIR6891-201ENST00000618788 93 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 MIR7154-201ENST00000620673 73 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AC119674.1-212ENST00000641155 993 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN9O95484 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN9O95484 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN9O95484 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CLDN9O95484 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CLDN9O95484 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLDN9O95484 AC090017.1-201ENST00000548612 1779 ntBASIC4.27□□□□□ -1.73
CLDN9O95484 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN9O95484 LINC01109-201ENST00000603837 3081 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLDN9O95484 OR52B1P-201ENST00000316506 909 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 AC011155.1-201ENST00000316512 456 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 MIR3065-201ENST00000390137 79 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 MIR320B1-201ENST00000390209 79 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLDN9O95484 SNRPFP1-201ENST00000414761 252 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 RPEP2-201ENST00000432149 701 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN9O95484 NDUFA5P1-201ENST00000433858 341 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN9O95484 AL627224.1-201ENST00000448334 444 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 RPS29P33-201ENST00000456717 146 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 AC093267.1-201ENST00000489176 961 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 RN7SL812P-201ENST00000493791 279 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN9O95484 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN9O95484 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN9O95484 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN9O95484 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN9O95484 RNU6-347P-201ENST00000516658 105 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 IGLV3-26-201ENST00000520756 302 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN9O95484 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN9O95484 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN9O95484 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN9O95484 AC018552.3-201ENST00000567416 561 ntBASIC4.26□□□□□ -1.73
CLDN9O95484 MTND6P33-201ENST00000571794 183 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms