Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX2-2O95096 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-2O95096 OR8K4P-201ENST00000534608 872 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX2-2O95096 NIFKP8-201ENST00000560500 874 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.61□□□□□ -1.67
NKX2-2O95096 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-2O95096 MIR3691-201ENST00000578066 90 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 MIR4666A-201ENST00000580160 79 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 MIR4691-201ENST00000583764 85 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-2O95096 AP001542.2-201ENST00000593141 364 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-2O95096 AC002069.2-201ENST00000603580 883 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 AC009163.6-201ENST00000612367 342 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 AL049794.2-201ENST00000616301 365 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 AC010975.3-201ENST00000618727 978 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 AC004232.3-201ENST00000622977 525 ntBASIC4.61□□□□□ -1.67
NKX2-2O95096 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-2O95096 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-2O95096 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-2O95096 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NKX2-2O95096 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.61□□□□□ -1.67
NKX2-2O95096 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-2O95096 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-2O95096 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.61□□□□□ -1.67
NKX2-2O95096 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
NKX2-2O95096 USP9YP4-201ENST00000424401 1745 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-2O95096 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-2O95096 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
NKX2-2O95096 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-2O95096 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-2O95096 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-2O95096 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-2O95096 RNU6-178P-201ENST00000384631 104 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 MIR765-201ENST00000390226 114 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-2O95096 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
NKX2-2O95096 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-2O95096 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-2O95096 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 BX510359.3-201ENST00000422168 306 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 USP9YP24-201ENST00000434374 697 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AL353597.2-202ENST00000434901 373 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AC073052.1-201ENST00000440417 714 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 USP9YP17-201ENST00000444617 696 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 AC134050.1-201ENST00000495088 933 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 RN7SKP66-201ENST00000516681 231 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-2O95096 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.6□□□□□ -1.67
NKX2-2O95096 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-2O95096 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.6□□□□□ -1.67
NKX2-2O95096 AGGF1P5-201ENST00000567900 919 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 TVP23CP2-201ENST00000571473 623 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 AC011453.2-201ENST00000603737 729 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AC087783.2-201ENST00000605070 562 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-2O95096 AC013244.3-201ENST00000605614 388 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AL353726.1-201ENST00000614041 1000 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AL121895.2-201ENST00000619558 447 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AC090506.2-201ENST00000624521 419 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 AL109659.3-201ENST00000624985 950 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-2O95096 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-2O95096 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
NKX2-2O95096 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-2O95096 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 AL034370.1-201ENST00000397254 1590 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NKX2-2O95096 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 AP005435.3-201ENST00000531260 3198 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 MRRFP1-201ENST00000435941 1675 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-2O95096 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NKX2-2O95096 C4BPAP1-201ENST00000415474 1893 ntBASIC4.6□□□□□ -1.67
NKX2-2O95096 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-2O95096 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms