Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.23□□□□□ -1.73
SEMA3DO95025 VN1R31P-201ENST00000417498 730 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 RBMY2KP-201ENST00000418221 992 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.23□□□□□ -1.73
SEMA3DO95025 DPY19L1P2-201ENST00000426647 915 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 BX119904.1-201ENST00000432026 348 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.23□□□□□ -1.73
SEMA3DO95025 SEPT14P1-201ENST00000458703 648 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 PPIAP21-201ENST00000464473 501 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AC053481.1-201ENST00000467217 306 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AC008694.2-201ENST00000517591 306 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AP006289.1-201ENST00000538089 277 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AC063949.1-201ENST00000552900 865 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AP001160.4-201ENST00000596971 382 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AC123786.2-201ENST00000603459 275 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.23□□□□□ -1.73
SEMA3DO95025 Z98200.1-201ENST00000607298 470 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 Mico1.1-201ENST00000611698 204 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AC004241.3-201ENST00000611728 517 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AL035461.2-201ENST00000619201 524 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.23□□□□□ -1.73
SEMA3DO95025 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AC016588.2-201ENST00000632484 3021 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SEMA3DO95025 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SEMA3DO95025 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.23□□□□□ -1.73
SEMA3DO95025 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SEMA3DO95025 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.22□□□□□ -1.73
SEMA3DO95025 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SEMA3DO95025 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEMA3DO95025 RN7SKP44-201ENST00000363602 316 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 MIR3065-201ENST00000390137 79 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEMA3DO95025 GLULP6-201ENST00000399502 913 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 RN7SKP216-201ENST00000411050 312 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.22□□□□□ -1.73
SEMA3DO95025 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.22□□□□□ -1.73
SEMA3DO95025 MTND4LP13-201ENST00000425022 298 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 DYNLL1P7-201ENST00000429273 258 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 SKP1P3-201ENST00000429280 487 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.22□□□□□ -1.73
SEMA3DO95025 MAPRE1P3-201ENST00000435438 796 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 RAB9AP5-201ENST00000437794 597 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 UBE2V1P3-201ENST00000439651 417 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 AL353748.1-201ENST00000440753 474 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 RAB9AP2-201ENST00000443911 597 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.22□□□□□ -1.73
SEMA3DO95025 RPS27AP17-201ENST00000463344 455 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.22□□□□□ -1.73
SEMA3DO95025 RPL23AP2-201ENST00000471227 466 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 RN7SL812P-201ENST00000493791 279 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.22□□□□□ -1.73
SEMA3DO95025 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.22□□□□□ -1.73
SEMA3DO95025 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SEMA3DO95025 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEMA3DO95025 AC084783.1-201ENST00000565846 910 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 AL139286.1-201ENST00000604465 483 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 AC020634.1-201ENST00000608701 549 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 AL138721.1-201ENST00000616756 179 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.22□□□□□ -1.73
SEMA3DO95025 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.22□□□□□ -1.73
SEMA3DO95025 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SEMA3DO95025 NOL8P1-201ENST00000508336 3529 ntBASIC4.22□□□□□ -1.73
SEMA3DO95025 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEMA3DO95025 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SEMA3DO95025 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SEMA3DO95025 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SEMA3DO95025 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SEMA3DO95025 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.21□□□□□ -1.74
SEMA3DO95025 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SEMA3DO95025 MIR129-1-201ENST00000384972 72 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SEMA3DO95025 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SEMA3DO95025 RAC1P3-201ENST00000416129 580 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 RPL12P34-201ENST00000424532 479 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 AL132765.1-201ENST00000434165 553 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 MTND2P2-201ENST00000434633 945 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.21□□□□□ -1.74
SEMA3DO95025 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.21□□□□□ -1.74
SEMA3DO95025 AC104306.1-201ENST00000449702 371 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 AL645939.1-201ENST00000453429 797 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.21□□□□□ -1.74
SEMA3DO95025 RN7SL354P-201ENST00000469282 294 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.21□□□□□ -1.74
SEMA3DO95025 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.21□□□□□ -1.74
SEMA3DO95025 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.21□□□□□ -1.74
SEMA3DO95025 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.21□□□□□ -1.74
SEMA3DO95025 AC079587.1-201ENST00000603846 277 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 AL160290.3-201ENST00000604869 165 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 AC100827.5-201ENST00000615883 426 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms