Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX4O60224 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX4O60224 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.53□□□□□ -1.68
SSX4O60224 AC010376.1-201ENST00000522101 334 ntBASIC4.53□□□□□ -1.68
SSX4O60224 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.53□□□□□ -1.68
SSX4O60224 AP001922.4-201ENST00000526967 290 ntBASIC4.53□□□□□ -1.68
SSX4O60224 AC005868.1-201ENST00000536421 331 ntBASIC4.53□□□□□ -1.68
SSX4O60224 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSX4O60224 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX4O60224 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.53□□□□□ -1.68
SSX4O60224 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX4O60224 AL391001.1-201ENST00000602747 715 ntBASIC4.53□□□□□ -1.68
SSX4O60224 PSMA6P4-201ENST00000603247 718 ntBASIC4.53□□□□□ -1.68
SSX4O60224 SNORD91B-202ENST00000608459 222 ntBASIC4.53□□□□□ -1.68
SSX4O60224 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSX4O60224 AC108359.1-201ENST00000616451 1211 ntBASIC4.53□□□□□ -1.68
SSX4O60224 AP003485.1-201ENST00000625093 753 ntBASIC4.53□□□□□ -1.68
SSX4O60224 AL353662.3-201ENST00000625131 237 ntBASIC4.53□□□□□ -1.68
SSX4O60224 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX4O60224 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSX4O60224 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 AL034370.1-201ENST00000397254 1590 ntBASIC4.53□□□□□ -1.69
SSX4O60224 AC104118.1-201ENST00000607625 1589 ntBASIC4.53□□□□□ -1.69
SSX4O60224 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
SSX4O60224 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX4O60224 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 AC000123.3-201ENST00000624029 4975 ntBASIC4.52□□□□□ -1.69
SSX4O60224 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX4O60224 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SSX4O60224 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX4O60224 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX4O60224 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SSX4O60224 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.52□□□□□ -1.69
SSX4O60224 CYCSP10-201ENST00000417973 294 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC013429.2-201ENST00000418798 781 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX4O60224 FABP7P2-201ENST00000429946 379 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AL645638.1-201ENST00000440519 361 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX4O60224 MTND2P8-201ENST00000450555 1025 ntBASIC4.52□□□□□ -1.69
SSX4O60224 DNAJB5P1-201ENST00000454004 806 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX4O60224 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX4O60224 AC022795.1-201ENST00000473808 480 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC090114.3-201ENST00000479267 829 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC090686.1-201ENST00000481577 749 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC104108.1-201ENST00000509930 412 ntBASIC4.52□□□□□ -1.69
SSX4O60224 RN7SKP147-201ENST00000517154 244 ntBASIC4.52□□□□□ -1.69
SSX4O60224 HMGB1P19-201ENST00000517578 577 ntBASIC4.52□□□□□ -1.69
SSX4O60224 IGKV2-36-201ENST00000519999 223 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC024940.3-201ENST00000538551 316 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX4O60224 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.52□□□□□ -1.69
SSX4O60224 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX4O60224 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.52□□□□□ -1.69
SSX4O60224 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SSX4O60224 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.52□□□□□ -1.69
SSX4O60224 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX4O60224 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.52□□□□□ -1.69
SSX4O60224 AC096947.1-201ENST00000603233 470 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC069431.2-201ENST00000604149 1099 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC009027.1-201ENST00000604510 479 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC010200.2-201ENST00000605098 235 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC243654.2-201ENST00000612843 443 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC099494.2-201ENST00000623371 978 ntBASIC4.52□□□□□ -1.69
SSX4O60224 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SSX4O60224 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX4O60224 AL450326.2-201ENST00000421913 1962 ntBASIC4.52□□□□□ -1.69
SSX4O60224 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SSX4O60224 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX4O60224 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX4O60224 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SSX4O60224 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SSX4O60224 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 AC073055.1-201ENST00000456901 1621 ntBASIC4.51□□□□□ -1.69
SSX4O60224 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SSX4O60224 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX4O60224 MIR600-201ENST00000385007 98 ntBASIC4.51□□□□□ -1.69
SSX4O60224 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX4O60224 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SSX4O60224 RNU2-50P-201ENST00000410494 143 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms