Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LDB2O43679 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.86□□□□□ -1.63
LDB2O43679 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 INTS6P1-201ENST00000504674 2530 ntBASIC4.86□□□□□ -1.63
LDB2O43679 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
LDB2O43679 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LDB2O43679 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LDB2O43679 RNU6-236P-201ENST00000363886 106 ntBASIC4.86□□□□□ -1.63
LDB2O43679 RNY3P9-201ENST00000384727 106 ntBASIC4.86□□□□□ -1.63
LDB2O43679 RNU6-932P-201ENST00000391108 106 ntBASIC4.86□□□□□ -1.63
LDB2O43679 EI24P3-201ENST00000399046 1062 ntBASIC4.86□□□□□ -1.63
LDB2O43679 MTCO2P31-201ENST00000402702 684 ntBASIC4.86□□□□□ -1.63
LDB2O43679 RN7SKP97-201ENST00000410966 333 ntBASIC4.86□□□□□ -1.63
LDB2O43679 AL590806.1-201ENST00000415818 853 ntBASIC4.86□□□□□ -1.63
LDB2O43679 RPL22P18-201ENST00000417197 377 ntBASIC4.86□□□□□ -1.63
LDB2O43679 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.86□□□□□ -1.63
LDB2O43679 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.86□□□□□ -1.63
LDB2O43679 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.86□□□□□ -1.63
LDB2O43679 HSPE1P16-201ENST00000426640 348 ntBASIC4.86□□□□□ -1.63
LDB2O43679 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.86□□□□□ -1.63
LDB2O43679 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.86□□□□□ -1.63
LDB2O43679 SEPT14P24-201ENST00000447236 180 ntBASIC4.86□□□□□ -1.63
LDB2O43679 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.86□□□□□ -1.63
LDB2O43679 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.86□□□□□ -1.63
LDB2O43679 RNA5SP303-201ENST00000516192 130 ntBASIC4.86□□□□□ -1.63
LDB2O43679 RNU6-709P-201ENST00000517257 104 ntBASIC4.86□□□□□ -1.63
LDB2O43679 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.86□□□□□ -1.63
LDB2O43679 LRRC6P1-201ENST00000532188 885 ntBASIC4.86□□□□□ -1.63
LDB2O43679 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.86□□□□□ -1.63
LDB2O43679 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.86□□□□□ -1.63
LDB2O43679 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.86□□□□□ -1.63
LDB2O43679 SNORD39.2-201ENST00000579995 76 ntBASIC4.86□□□□□ -1.63
LDB2O43679 MIR4480-201ENST00000582492 71 ntBASIC4.86□□□□□ -1.63
LDB2O43679 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.86□□□□□ -1.63
LDB2O43679 AC008751.2-201ENST00000597885 980 ntBASIC4.86□□□□□ -1.63
LDB2O43679 GAS5-AS1-201ENST00000602767 694 ntBASIC4.86□□□□□ -1.63
LDB2O43679 AC024060.1-201ENST00000607052 494 ntBASIC4.86□□□□□ -1.63
LDB2O43679 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.86□□□□□ -1.63
LDB2O43679 AC010435.1-201ENST00000623353 1177 ntBASIC4.86□□□□□ -1.63
LDB2O43679 AC138965.3-201ENST00000623875 498 ntBASIC4.86□□□□□ -1.63
LDB2O43679 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 ZNF652P1-201ENST00000442420 1309 ntBASIC4.86□□□□□ -1.63
LDB2O43679 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.86□□□□□ -1.63
LDB2O43679 MTCO1P18-201ENST00000455518 1419 ntBASIC4.86□□□□□ -1.63
LDB2O43679 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
LDB2O43679 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LDB2O43679 AL034370.1-201ENST00000397254 1590 ntBASIC4.86□□□□□ -1.63
LDB2O43679 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LDB2O43679 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.85□□□□□ -1.63
LDB2O43679 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
LDB2O43679 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 RNU4-28P-201ENST00000364739 141 ntBASIC4.85□□□□□ -1.63
LDB2O43679 RNU6-729P-201ENST00000384399 107 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AL035419.1-201ENST00000397037 564 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC233289.1-201ENST00000403700 508 ntBASIC4.85□□□□□ -1.63
LDB2O43679 HMGB1P13-201ENST00000406019 642 ntBASIC4.85□□□□□ -1.63
LDB2O43679 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.85□□□□□ -1.63
LDB2O43679 U3.35-201ENST00000408405 208 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.85□□□□□ -1.63
LDB2O43679 AC107081.1-201ENST00000414975 361 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.85□□□□□ -1.63
LDB2O43679 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.85□□□□□ -1.63
LDB2O43679 AL645608.4-201ENST00000423619 154 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC104837.2-201ENST00000427236 424 ntBASIC4.85□□□□□ -1.63
LDB2O43679 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.85□□□□□ -1.63
LDB2O43679 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.85□□□□□ -1.63
LDB2O43679 GTF2IP3-201ENST00000433887 494 ntBASIC4.85□□□□□ -1.63
LDB2O43679 SETP8-201ENST00000435341 628 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC112498.1-201ENST00000444401 332 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.85□□□□□ -1.63
LDB2O43679 ZNF886P-201ENST00000450781 723 ntBASIC4.85□□□□□ -1.63
LDB2O43679 HSPE1P22-201ENST00000456856 327 ntBASIC4.85□□□□□ -1.63
LDB2O43679 RPS3AP41-201ENST00000462701 778 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.85□□□□□ -1.63
LDB2O43679 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.85□□□□□ -1.63
LDB2O43679 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.85□□□□□ -1.63
LDB2O43679 GAPDHP56-201ENST00000506031 988 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.85□□□□□ -1.63
LDB2O43679 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.85□□□□□ -1.63
LDB2O43679 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LDB2O43679 BTF3P13-201ENST00000513224 490 ntBASIC4.85□□□□□ -1.63
LDB2O43679 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.85□□□□□ -1.63
LDB2O43679 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.85□□□□□ -1.63
LDB2O43679 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.85□□□□□ -1.63
LDB2O43679 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.85□□□□□ -1.63
LDB2O43679 OR8I1P-201ENST00000529291 931 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms