Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 PRELID3BP10-201ENST00000431957 584 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.23□□□□□ -1.57
PROM1O43490 OR6D1P-201ENST00000436165 939 ntBASIC5.23□□□□□ -1.57
PROM1O43490 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.23□□□□□ -1.57
PROM1O43490 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.23□□□□□ -1.57
PROM1O43490 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.23□□□□□ -1.57
PROM1O43490 RN7SL583P-201ENST00000475692 287 ntBASIC5.23□□□□□ -1.57
PROM1O43490 RN7SL799P-201ENST00000475891 298 ntBASIC5.23□□□□□ -1.57
PROM1O43490 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 AC021146.8-201ENST00000507455 733 ntBASIC5.23□□□□□ -1.57
PROM1O43490 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.23□□□□□ -1.57
PROM1O43490 MTND3P5-201ENST00000512798 333 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.23□□□□□ -1.57
PROM1O43490 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.23□□□□□ -1.57
PROM1O43490 HIGD1AP17-201ENST00000554576 276 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.23□□□□□ -1.57
PROM1O43490 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.23□□□□□ -1.57
PROM1O43490 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.23□□□□□ -1.57
PROM1O43490 ACTR3BP3-201ENST00000565577 979 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.23□□□□□ -1.57
PROM1O43490 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.23□□□□□ -1.57
PROM1O43490 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.23□□□□□ -1.57
PROM1O43490 AC009237.13-201ENST00000603193 276 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AC080078.2-201ENST00000603766 501 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AL139124.1-201ENST00000609123 421 ntBASIC5.23□□□□□ -1.57
PROM1O43490 MIR6133-201ENST00000617057 108 ntBASIC5.23□□□□□ -1.57
PROM1O43490 VN1R7P-201ENST00000619242 903 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AL691477.1-201ENST00000624398 162 ntBASIC5.23□□□□□ -1.57
PROM1O43490 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.23□□□□□ -1.57
PROM1O43490 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.23□□□□□ -1.57
PROM1O43490 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 AC007938.2-201ENST00000604666 2634 ntBASIC5.23□□□□□ -1.57
PROM1O43490 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PROM1O43490 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PROM1O43490 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 AC092079.1-201ENST00000558620 1985 ntBASIC5.22□□□□□ -1.57
PROM1O43490 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.22□□□□□ -1.57
PROM1O43490 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 Y_RNA.192-201ENST00000363977 102 ntBASIC5.22□□□□□ -1.57
PROM1O43490 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PROM1O43490 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PROM1O43490 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 RNA5SP296-201ENST00000410523 111 ntBASIC5.22□□□□□ -1.57
PROM1O43490 NPM1P40-201ENST00000412758 733 ntBASIC5.22□□□□□ -1.57
PROM1O43490 RPSAP35-201ENST00000413753 818 ntBASIC5.22□□□□□ -1.57
PROM1O43490 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 AC004074.1-201ENST00000421810 1063 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.22□□□□□ -1.57
PROM1O43490 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.22□□□□□ -1.57
PROM1O43490 AC129850.1-201ENST00000436203 508 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC234064.1-201ENST00000436312 247 ntBASIC5.22□□□□□ -1.57
PROM1O43490 YWHAZP7-201ENST00000436906 631 ntBASIC5.22□□□□□ -1.57
PROM1O43490 CACYBPP1-201ENST00000438592 684 ntBASIC5.22□□□□□ -1.57
PROM1O43490 MTND3P1-201ENST00000441336 220 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC019185.1-201ENST00000442718 389 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 AC005002.1-201ENST00000447458 540 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 AL591623.2-201ENST00000449978 222 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC097262.1-201ENST00000452559 548 ntBASIC5.22□□□□□ -1.57
PROM1O43490 RPL10P17-201ENST00000453852 316 ntBASIC5.22□□□□□ -1.57
PROM1O43490 MTCO2P18-201ENST00000457151 658 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 AC011979.1-201ENST00000472300 483 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC091959.2-201ENST00000477363 321 ntBASIC5.22□□□□□ -1.57
PROM1O43490 RPL32P9-201ENST00000487963 407 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC104971.1-201ENST00000495117 578 ntBASIC5.22□□□□□ -1.57
PROM1O43490 RN7SL466P-201ENST00000497546 295 ntBASIC5.22□□□□□ -1.57
PROM1O43490 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.22□□□□□ -1.57
PROM1O43490 RNA5SP34-201ENST00000516887 130 ntBASIC5.22□□□□□ -1.57
PROM1O43490 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.22□□□□□ -1.57
PROM1O43490 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 AC007115.1-201ENST00000546853 234 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms