Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC105074.1-201ENST00000623380 3095 ntBASIC4.37□□□□□ -1.71
LSM1O15116 NXPH1-205ENST00000602349 1953 ntBASIC4.36□□□□□ -1.71
LSM1O15116 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.36□□□□□ -1.71
LSM1O15116 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LSM1O15116 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LSM1O15116 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LSM1O15116 MARK2P15-201ENST00000432204 2186 ntBASIC4.36□□□□□ -1.71
LSM1O15116 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
LSM1O15116 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LSM1O15116 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LSM1O15116 RNU1-44P-201ENST00000384453 163 ntBASIC4.36□□□□□ -1.71
LSM1O15116 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LSM1O15116 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LSM1O15116 AL138878.1-201ENST00000405131 347 ntBASIC4.36□□□□□ -1.71
LSM1O15116 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.36□□□□□ -1.71
LSM1O15116 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.36□□□□□ -1.71
LSM1O15116 MIR1178-201ENST00000408396 91 ntBASIC4.36□□□□□ -1.71
LSM1O15116 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.36□□□□□ -1.71
LSM1O15116 AC062016.2-201ENST00000420950 676 ntBASIC4.36□□□□□ -1.71
LSM1O15116 FTH1P6-201ENST00000430768 320 ntBASIC4.36□□□□□ -1.71
LSM1O15116 CDY14P-201ENST00000431260 1014 ntBASIC4.36□□□□□ -1.71
LSM1O15116 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.36□□□□□ -1.71
LSM1O15116 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.36□□□□□ -1.71
LSM1O15116 CDY12P-201ENST00000440679 1015 ntBASIC4.36□□□□□ -1.71
LSM1O15116 CDY13P-201ENST00000445813 1015 ntBASIC4.36□□□□□ -1.71
LSM1O15116 CDY23P-201ENST00000451661 1014 ntBASIC4.36□□□□□ -1.71
LSM1O15116 C1DP3-201ENST00000455013 423 ntBASIC4.36□□□□□ -1.71
LSM1O15116 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.36□□□□□ -1.71
LSM1O15116 RNU6-1218P-201ENST00000458990 108 ntBASIC4.36□□□□□ -1.71
LSM1O15116 HMGN1P8-201ENST00000463578 288 ntBASIC4.36□□□□□ -1.71
LSM1O15116 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.36□□□□□ -1.71
LSM1O15116 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
LSM1O15116 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.36□□□□□ -1.71
LSM1O15116 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.36□□□□□ -1.71
LSM1O15116 HNRNPKP5-201ENST00000515300 253 ntBASIC4.36□□□□□ -1.71
LSM1O15116 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.36□□□□□ -1.71
LSM1O15116 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.36□□□□□ -1.71
LSM1O15116 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.36□□□□□ -1.71
LSM1O15116 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.36□□□□□ -1.71
LSM1O15116 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.36□□□□□ -1.71
LSM1O15116 EDDM3DP-201ENST00000554692 434 ntBASIC4.36□□□□□ -1.71
LSM1O15116 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.36□□□□□ -1.71
LSM1O15116 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.36□□□□□ -1.71
LSM1O15116 AC244505.7-201ENST00000599675 272 ntBASIC4.36□□□□□ -1.71
LSM1O15116 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.36□□□□□ -1.71
LSM1O15116 AC103792.1-201ENST00000603591 919 ntBASIC4.36□□□□□ -1.71
LSM1O15116 MIR6853-201ENST00000619642 74 ntBASIC4.36□□□□□ -1.71
LSM1O15116 AC145207.9-201ENST00000623802 325 ntBASIC4.36□□□□□ -1.71
LSM1O15116 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.36□□□□□ -1.71
LSM1O15116 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.36□□□□□ -1.71
LSM1O15116 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.36□□□□□ -1.71
LSM1O15116 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.36□□□□□ -1.71
LSM1O15116 AC006971.1-201ENST00000407916 4486 ntBASIC4.36□□□□□ -1.71
LSM1O15116 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LSM1O15116 AC139769.1-204ENST00000472297 1931 ntBASIC4.36□□□□□ -1.71
LSM1O15116 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.36□□□□□ -1.71
LSM1O15116 AC009229.4-201ENST00000623854 1947 ntBASIC4.36□□□□□ -1.71
LSM1O15116 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
LSM1O15116 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LSM1O15116 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.36□□□□□ -1.71
LSM1O15116 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LSM1O15116 AC125257.1-201ENST00000560400 2930 ntBASIC4.35□□□□□ -1.71
LSM1O15116 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.35□□□□□ -1.71
LSM1O15116 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
LSM1O15116 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
LSM1O15116 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.35□□□□□ -1.71
LSM1O15116 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.35□□□□□ -1.71
LSM1O15116 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 ZNF137P-201ENST00000456718 1920 ntBASIC4.35□□□□□ -1.71
LSM1O15116 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 RNA5SP22-201ENST00000365393 109 ntBASIC4.35□□□□□ -1.71
LSM1O15116 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 AL109941.1-201ENST00000401925 229 ntBASIC4.35□□□□□ -1.71
LSM1O15116 RN7SKP216-201ENST00000411050 312 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.35□□□□□ -1.71
LSM1O15116 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 RPL23AP25-201ENST00000430973 463 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AL627308.1-201ENST00000435693 821 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LSM1O15116 AC092013.1-201ENST00000438795 332 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 RPL21P71-201ENST00000465598 459 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 MTND4LP2-201ENST00000502312 285 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.35□□□□□ -1.71
LSM1O15116 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.35□□□□□ -1.71
LSM1O15116 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.35□□□□□ -1.71
LSM1O15116 VN1R79P-201ENST00000593540 513 ntBASIC4.35□□□□□ -1.71
LSM1O15116 BPIFA4P-203ENST00000603168 689 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AL031320.1-201ENST00000604177 357 ntBASIC4.35□□□□□ -1.71
LSM1O15116 AC016769.4-201ENST00000616893 535 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms