Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SNORA11F-201ENST00000408237 128 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AL139128.1-201ENST00000413921 941 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 OR51A6P-201ENST00000418680 1004 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC092647.1-201ENST00000420654 287 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AL772161.1-201ENST00000439130 476 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 HMGB3P22-202ENST00000451823 572 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RPL23AP81-201ENST00000455252 467 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RNU6-599P-201ENST00000459383 107 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RNU6-1193P-201ENST00000459461 107 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RPS29P19-201ENST00000479709 171 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC083982.1-201ENST00000485679 344 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC147055.1-201ENST00000509261 750 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RNU6-362P-201ENST00000516736 90 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC008147.3-201ENST00000548666 354 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 SULT1C2P2-201ENST00000562517 294 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC007599.1-201ENST00000568688 1174 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 MIR4480-201ENST00000582492 71 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC068020.1-201ENST00000594215 661 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 QTRT1P1-201ENST00000604344 1078 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC012409.3-201ENST00000611343 981 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC100827.5-201ENST00000615883 426 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 uc_338.13-201ENST00000618243 179 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RNU6-368P-201ENST00000620928 107 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RNU6-538P-201ENST00000622329 107 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC091953.3-201ENST00000623220 236 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 HSPD1P11-201ENST00000508643 1702 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 RN7SKP103-201ENST00000363848 320 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC106901.1-201ENST00000425086 698 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AL157831.1-201ENST00000426134 473 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 VDAC1P6-201ENST00000430062 855 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 TPTE2P3-201ENST00000441562 1189 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 RPS23P1-201ENST00000491662 432 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AL133372.1-201ENST00000493565 745 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC105233.1-201ENST00000498840 781 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 PPM1AP1-201ENST00000502740 1135 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 PGBD4P4-201ENST00000509673 613 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 IGKV2-38-201ENST00000517443 247 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC026616.1-201ENST00000523157 525 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC122134.1-201ENST00000565664 1104 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 MIR4700-201ENST00000578311 74 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 MIR4270-201ENST00000581799 70 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC068790.7-201ENST00000602347 528 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC113403.1-201ENST00000604910 193 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AL118556.2-201ENST00000614375 824 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AL445363.3-201ENST00000623080 671 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC021106.3-201ENST00000623925 531 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC107021.2-201ENST00000567714 2095 ntBASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM49D1C9J1S8 AL592148.3-201ENST00000608771 2646 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AL589994.1-201ENST00000404962 340 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AC006065.1-201ENST00000422539 802 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 RPEP3-201ENST00000425462 676 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AL360081.1-201ENST00000428299 555 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AC006466.1-201ENST00000438721 289 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 AL512326.1-201ENST00000443050 721 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 ARL2BPP10-201ENST00000446487 531 ntBASIC4.19□□□□□ -1.74
TRIM49D1C9J1S8 EEF1A1P1-201ENST00000447052 739 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms