Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 AC104687.2-201ENST00000604442 342 ntBASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 AC093424.1-201ENST00000604999 338 ntBASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 AC007497.1-201ENST00000610421 561 ntBASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 MIR6853-201ENST00000619642 74 ntBASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 CR381572.2-201ENST00000624852 397 ntBASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 AC015813.6-201ENST00000624409 5808 ntBASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PCDHB7Q9Y5E2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
PCDHB7Q9Y5E2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.34□□□□□ -1.56
PCDHB7Q9Y5E2 AC026523.2-201ENST00000625039 7739 ntBASIC5.34□□□□□ -1.56
PCDHB7Q9Y5E2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.34□□□□□ -1.56
PCDHB7Q9Y5E2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 MTCO1P15-201ENST00000529569 1526 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 VN2R3P-201ENST00000422626 1412 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 Z98755.1-201ENST00000407015 1384 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC026951.1-201ENST00000559530 2459 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 RN7SKP145-201ENST00000363291 303 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 SNORD65C-201ENST00000390962 71 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 RNA5SP332-201ENST00000391063 115 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 DNAJC19P6-201ENST00000401853 280 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AL136131.1-201ENST00000406079 803 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC114755.2-201ENST00000413520 361 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 VTA1P1-201ENST00000414044 866 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 RPS27AP6-201ENST00000427962 448 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 MED28P3-201ENST00000444288 531 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AL050341.1-201ENST00000447743 313 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AL035407.2-201ENST00000454090 378 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC113420.1-201ENST00000507903 571 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 RNU6-311P-201ENST00000516224 102 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC008083.2-201ENST00000546707 476 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC087897.1-201ENST00000550134 156 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 MTND3P12-201ENST00000559068 328 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC009712.1-201ENST00000564938 316 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 MIR4284-201ENST00000578924 81 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC234772.3-201ENST00000602277 528 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AL049794.2-201ENST00000616301 365 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC145207.9-201ENST00000623802 325 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 AC139713.2-210ENST00000641741 992 ntBASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB7Q9Y5E2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 NCLP2-201ENST00000416078 1462 ntBASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 CCT8P1-201ENST00000413611 1657 ntBASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 AL450345.1-202ENST00000605741 3881 ntBASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 MIR320B1-201ENST00000390209 79 ntBASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 XKRYP1-201ENST00000423438 492 ntBASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 OR2B7P-201ENST00000429302 934 ntBASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 XKRYP2-201ENST00000432915 492 ntBASIC5.32□□□□□ -1.56
PCDHB7Q9Y5E2 NPM1P18-201ENST00000434232 732 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms