Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL161909.1-201ENST00000397390 712 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 RN7SKP33-201ENST00000410942 340 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 RPS3AP25-201ENST00000411660 793 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 AC007738.1-201ENST00000413892 348 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 AC018644.1-201ENST00000429934 551 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 MTCYBP29-201ENST00000436327 1006 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 ISCUP1-201ENST00000454451 448 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 SEPT7P3-201ENST00000455017 621 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 AC012123.2-201ENST00000485809 248 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 AP003497.2-201ENST00000624220 967 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 HPVC1-201ENST00000629899 1198 ntBASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SHROOM4Q9ULL8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 FTLP19-201ENST00000433300 394 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 RPL23AP43-201ENST00000446445 471 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AL500527.1-201ENST00000448532 255 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 MTND5P8-201ENST00000449817 1083 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 RPL5P32-201ENST00000454085 879 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 HAUS1P1-201ENST00000505275 832 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AC006499.6-201ENST00000511169 607 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AC087888.1-201ENST00000550884 1254 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AC015914.2-201ENST00000618167 288 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AC011815.3-201ENST00000624194 473 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 MTCO1P7-201ENST00000419523 1542 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AL034403.1-201ENST00000399414 885 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 CRYBB2P1-203ENST00000415709 538 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 MTND4LP14-201ENST00000429447 288 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 MTND4LP7-201ENST00000431728 294 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AC090543.1-201ENST00000492168 485 ntBASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC8.51□□□□□ -1.05
SHROOM4Q9ULL8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 AL672167.1-203ENST00000641299 2975 ntBASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 AC245517.2-201ENST00000442890 346 ntBASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 ASNSP4-201ENST00000511103 447 ntBASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 MTCO2P22-201ENST00000603246 681 ntBASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 AC084373.1-201ENST00000603311 235 ntBASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 MIR6867-201ENST00000610636 67 ntBASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 AC006065.6-201ENST00000625201 545 ntBASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC8.5□□□□□ -1.05
SHROOM4Q9ULL8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 AC011755.1-201ENST00000623763 2049 ntBASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 5S_rRNA.1-201ENST00000364415 116 ntBASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 PTMAP2-201ENST00000397627 327 ntBASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 AL117339.2-201ENST00000430475 180 ntBASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 AC006326.1-201ENST00000445465 787 ntBASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 AC089999.1-201ENST00000460336 374 ntBASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 AC091564.1-201ENST00000464563 479 ntBASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 AC090181.2-201ENST00000602975 672 ntBASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 AC079298.2-201ENST00000623885 459 ntBASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.49□□□□□ -1.05
SHROOM4Q9ULL8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms