Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC007685.1-201ENST00000329806 452 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 U3.15-201ENST00000365398 212 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RHOT1P2-201ENST00000366423 333 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 MIR93-201ENST00000385024 80 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RN7SKP206-201ENST00000410823 293 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 TRGV6-201ENST00000417928 299 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC004552.1-201ENST00000419089 348 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RBMY2QP-201ENST00000429799 1147 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 CEACAMP7-201ENST00000444105 496 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RAB28P3-201ENST00000448325 597 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RPL5P32-201ENST00000454085 879 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RPS26P3-201ENST00000470205 348 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 LARP7P4-201ENST00000481075 878 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC090543.2-201ENST00000483963 348 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC004057.1-201ENST00000485827 348 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 IGKV3D-34-201ENST00000522638 302 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC021006.3-201ENST00000530771 192 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC105129.1-201ENST00000560250 297 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 OR1AB1P-201ENST00000585564 761 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AL512782.1-201ENST00000603093 364 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AL133338.2-201ENST00000604292 736 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 MIR6768-201ENST00000610734 72 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC019278.1-201ENST00000623516 479 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 MIR4302-201ENST00000638058 60 ntBASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTNNBIP1Q9NSA3 AC100871.1-201ENST00000507871 1456 ntBASIC3.59□□□□□ -1.84
CTNNBIP1Q9NSA3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CTNNBIP1Q9NSA3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.59□□□□□ -1.84
CTNNBIP1Q9NSA3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CTNNBIP1Q9NSA3 AC097504.1-201ENST00000515103 2415 ntBASIC3.59□□□□□ -1.84
CTNNBIP1Q9NSA3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.59□□□□□ -1.84
CTNNBIP1Q9NSA3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AL118496.1-201ENST00000440201 1812 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 MIR513A2-201ENST00000385249 127 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 RNA5SP113-201ENST00000410486 84 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 RN7SKP222-201ENST00000410651 315 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 ARAFP1-201ENST00000422172 605 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AL049745.1-201ENST00000433953 286 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC005154.2-201ENST00000438110 379 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 EEF1B2P5-201ENST00000444820 548 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 ABCF2P2-201ENST00000450549 296 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC079804.1-201ENST00000461922 436 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC021205.1-201ENST00000468797 348 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 RPSAP50-201ENST00000481955 852 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 UBTFL9-201ENST00000534504 1148 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 TOMM20P2-201ENST00000540082 421 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AL161713.1-201ENST00000555538 145 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC090888.3-201ENST00000558917 509 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC008536.1-201ENST00000602872 669 ntBASIC3.58□□□□□ -1.84
CTNNBIP1Q9NSA3 AC123768.4-201ENST00000616244 701 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms