Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 ATP1B1P1-201ENST00000509767 915 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 SCARNA1-201ENST00000517138 166 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 AC021483.2-201ENST00000567415 758 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 MTND6P33-201ENST00000571794 183 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 OOSP1P2-201ENST00000579644 351 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 AC005242.1-201ENST00000585658 438 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 QTRT1P1-201ENST00000604344 1078 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 RMST_5.1-201ENST00000618704 126 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 AC019080.5-201ENST00000624891 757 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 OR56B2P-202ENST00000641377 2453 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SIX2Q9NPC8 AL356317.1-201ENST00000396110 1436 ntBASIC4.72□□□□□ -1.65
SIX2Q9NPC8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
SIX2Q9NPC8 AC090220.1-201ENST00000593078 1699 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 RNU1-15P-201ENST00000353977 144 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 RNA5SP505-201ENST00000364748 108 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 ATP5F1P6-201ENST00000402768 767 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 GSTM3P2-201ENST00000412746 530 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC069213.2-201ENST00000420238 366 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 ARL2BPP3-201ENST00000421226 480 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 MTCO2P1-201ENST00000424648 477 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC073335.1-201ENST00000427776 363 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AL512637.2-201ENST00000431287 1256 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 HMGN1P5-201ENST00000448591 263 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AL162591.2-201ENST00000449634 317 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 RPL35AP15-201ENST00000468042 339 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 RPS26P28-201ENST00000470806 348 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC093801.2-201ENST00000503966 1050 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 OR5BC1P-201ENST00000529327 739 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 NOP56P3-201ENST00000549457 385 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AP005119.2-201ENST00000579735 1105 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AL354984.3-201ENST00000604803 325 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC100827.5-201ENST00000615883 426 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC022960.3-201ENST00000619794 441 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC019278.1-201ENST00000623516 479 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC055839.1-201ENST00000634467 498 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 FP325313.1-201ENST00000638228 703 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.66
SIX2Q9NPC8 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.71□□□□□ -1.66
SIX2Q9NPC8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 Z98755.1-201ENST00000407015 1384 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL133270.1-201ENST00000402635 279 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 RNU2-50P-201ENST00000410494 143 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 CBX1P3-201ENST00000413296 527 ntBASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX2Q9NPC8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms