Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL590365.1-201ENST00000450788 243 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC022080.2-201ENST00000452932 533 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AKR1D1P1-201ENST00000457236 936 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC015724.1-201ENST00000478577 156 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC124945.1-201ENST00000485133 188 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 KCTD9P5-201ENST00000504141 1170 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC079097.1-201ENST00000512187 1399 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AP001858.2-201ENST00000536213 601 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC025678.1-201ENST00000567861 338 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC027243.2-201ENST00000602530 724 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL136097.3-201ENST00000611097 505 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AP002833.3-201ENST00000625075 2265 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL161756.3-201ENST00000641216 2071 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 OFD1P17-201ENST00000437639 3018 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 UGT2B26P-201ENST00000508672 1613 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 MTCO1P14-201ENST00000441695 1559 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC138915.3-201ENST00000562908 1389 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 RNU1-84P-201ENST00000365447 164 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 FAT1P1-201ENST00000406588 507 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 RPL12P10-201ENST00000413498 498 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 USP9YP36-201ENST00000424581 829 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 AL158073.1-201ENST00000426848 1104 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 SDCBPP1-201ENST00000440192 890 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC079448.1-201ENST00000449377 373 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 FABP3P2-201ENST00000453169 399 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 AL133480.2-201ENST00000456723 487 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 RN7SL369P-201ENST00000477138 299 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 RPL5P33-201ENST00000487833 905 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC073648.3-201ENST00000504939 925 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC021678.1-201ENST00000505195 936 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 SNX18P24-201ENST00000505249 671 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 RNU6-583P-201ENST00000516012 92 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 Y_RNA.693-201ENST00000516641 110 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.11□□□□□ -1.43
SSU72Q9NP77 AL163952.1-202ENST00000569625 600 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSU72Q9NP77 RN7SL311P-201ENST00000579858 306 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 MIR4795-201ENST00000584182 89 ntBASIC6.11□□□□□ -1.43
SSU72Q9NP77 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms