Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 ATP5F1P2-201ENST00000398143 760 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AL450992.3-201ENST00000413192 568 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 SEPT7P8-201ENST00000413308 775 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 RPL5P30-201ENST00000465511 891 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AC012158.1-204ENST00000483430 465 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 TPT1P3-201ENST00000492841 512 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AL592156.1-201ENST00000508758 304 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 KCTD9P2-201ENST00000512203 1013 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AC108064.1-201ENST00000513791 460 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 RNA5SP360-201ENST00000516555 118 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 HMGB1P19-201ENST00000517578 577 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 IGKV2D-10-201ENST00000520194 281 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 GLRXP2-201ENST00000555594 321 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AC022916.3-201ENST00000592961 742 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AL133243.3-201ENST00000617415 3004 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 BTBD10P1-201ENST00000549824 1352 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 OR10D4P-201ENST00000525892 951 ntBASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 ASNSP1-204ENST00000641977 1664 ntBASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.79□□□□□ -1.8
KIAA1549Q9HCM3 AC116667.1-201ENST00000604855 2072 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 CYCSP19-201ENST00000411715 316 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 RPL23AP25-201ENST00000430973 463 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 GEMIN8P3-201ENST00000445417 720 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 HSFY6P-201ENST00000445573 403 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 RAD23BP3-201ENST00000454157 1152 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC099522.1-202ENST00000514718 367 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 BNIP3P5-201ENST00000562290 498 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC006130.2-201ENST00000586202 326 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC023043.4-201ENST00000612081 449 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC245389.2-201ENST00000616023 576 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC242843.1-201ENST00000618702 573 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 PROS2P-201ENST00000474651 1951 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 CASC19-255ENST00000641733 1385 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 VN1R8P-201ENST00000407739 893 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 EIF4EP1-201ENST00000422311 642 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AL158073.1-201ENST00000426848 1104 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC006326.1-201ENST00000445465 787 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 RPL23AP81-201ENST00000455252 467 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms