Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC022880.1-201ENST00000534017 973 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC008055.1-201ENST00000547032 609 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AL389895.1-201ENST00000554127 252 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 GTF2IP22-201ENST00000554443 182 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC023968.1-201ENST00000560719 475 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC078795.2-201ENST00000602835 1252 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC073046.2-201ENST00000604756 527 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AP000894.4-201ENST00000610185 483 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC123768.4-201ENST00000616244 701 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC009509.4-201ENST00000619202 509 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC231657.1-201ENST00000624313 397 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC005224.3-201ENST00000584683 2140 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC091305.2-201ENST00000624049 1576 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 AC015689.2-201ENST00000528172 1738 ntBASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM55Q9BYV6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 BCORP1-203ENST00000513194 5093 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AL079343.1-201ENST00000572358 1771 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 RN7SKP78-201ENST00000364711 318 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 SNORA43.1-201ENST00000364863 140 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 RNU6-921P-201ENST00000384361 107 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC004386.1-201ENST00000393214 761 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 DSTNP4-201ENST00000399472 474 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 RNU6-648P-201ENST00000410190 107 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 IPMKP1-201ENST00000425988 855 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 BX276092.6-201ENST00000430476 250 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC092427.1-201ENST00000439177 601 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 EPS15P1-201ENST00000448836 336 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 PPIAP20-201ENST00000449839 135 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AL645937.3-201ENST00000453647 936 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 BX276092.8-201ENST00000455722 250 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC010625.1-201ENST00000511296 403 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 NPM1P6-201ENST00000521088 871 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 IGKV3D-34-201ENST00000522638 302 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC005332.4-201ENST00000592752 579 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC090181.2-201ENST00000602975 672 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 RNU6-88P-201ENST00000606801 100 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC116447.1-201ENST00000613153 453 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 DLEU2_1.2-201ENST00000614667 120 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 MIR6811-201ENST00000620409 58 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AL137067.2-201ENST00000621202 131 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AL590240.3-201ENST00000621416 943 ntBASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM55Q9BYV6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms