Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 E2F6P2-201ENST00000420708 748 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX3Q99909 UBE2V1P6-201ENST00000430840 422 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.24□□□□□ -1.73
SSX3Q99909 RPL35AP21-201ENST00000437667 333 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX3Q99909 AL121877.1-201ENST00000453704 622 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AL445433.1-201ENST00000457507 257 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AC079168.1-201ENST00000458741 345 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AL049829.1-201ENST00000465411 156 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AC004453.1-201ENST00000487895 408 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AC109462.1-201ENST00000491087 368 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX3Q99909 AC083829.1-201ENST00000503756 657 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX3Q99909 AC106806.2-201ENST00000509365 500 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AC110792.2-201ENST00000510278 224 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 RNA5SP497-201ENST00000516081 97 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX3Q99909 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX3Q99909 BUD31P1-201ENST00000521828 359 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.24□□□□□ -1.73
SSX3Q99909 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX3Q99909 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 AC092451.2-201ENST00000538746 658 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 GLRXP2-201ENST00000555594 321 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.24□□□□□ -1.73
SSX3Q99909 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 AC006116.3-201ENST00000592968 361 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.24□□□□□ -1.73
SSX3Q99909 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX3Q99909 RMST_10.1-201ENST00000616309 154 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX3Q99909 AC099494.2-201ENST00000623371 978 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX3Q99909 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX3Q99909 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX3Q99909 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 AL139811.1-201ENST00000424779 2299 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX3Q99909 AC009951.1-201ENST00000623674 2614 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
SSX3Q99909 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSX3Q99909 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SSX3Q99909 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SSX3Q99909 AC008432.1-201ENST00000615912 1320 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSX3Q99909 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SSX3Q99909 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX3Q99909 AL645927.1-201ENST00000396783 406 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 RNA5SP146-201ENST00000410743 123 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX3Q99909 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX3Q99909 AC093162.1-201ENST00000419682 124 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 SAGE2P-201ENST00000420011 2126 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX3Q99909 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.23□□□□□ -1.73
SSX3Q99909 RPS27P18-201ENST00000431701 247 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX3Q99909 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX3Q99909 RPS29P10-201ENST00000439197 166 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX3Q99909 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX3Q99909 RPL6P5-201ENST00000445678 828 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX3Q99909 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX3Q99909 RPL23AP71-201ENST00000470966 469 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 RPL7AP6-201ENST00000477943 801 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX3Q99909 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX3Q99909 RNA5SP303-201ENST00000516192 130 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX3Q99909 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.23□□□□□ -1.73
SSX3Q99909 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.23□□□□□ -1.73
SSX3Q99909 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX3Q99909 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.23□□□□□ -1.73
SSX3Q99909 AC090751.1-201ENST00000566966 267 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX3Q99909 AC087763.1-201ENST00000603391 286 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 RNF138P2-201ENST00000603490 592 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.23□□□□□ -1.73
SSX3Q99909 AL445222.1-201ENST00000607259 628 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 MIR8069-1-201ENST00000616627 86 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 MIR8069-2-201ENST00000621412 86 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX3Q99909 AC080188.3-201ENST00000624842 748 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 AC135068.12-201ENST00000637370 931 ntBASIC4.23□□□□□ -1.73
SSX3Q99909 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSX3Q99909 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX3Q99909 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SSX3Q99909 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SSX3Q99909 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 AC022893.2-201ENST00000564832 3296 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms