Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC121161.1-201ENST00000510606 652 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC005351.1-201ENST00000511152 786 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 IGKV2D-10-201ENST00000520194 281 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.8□□□□□ -1.64
PKP4Q99569 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.8□□□□□ -1.64
PKP4Q99569 AC005868.1-201ENST00000536421 331 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.8□□□□□ -1.64
PKP4Q99569 AC093014.1-201ENST00000548926 724 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC051619.2-201ENST00000559063 397 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.8□□□□□ -1.64
PKP4Q99569 AC016180.1-201ENST00000567945 403 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.8□□□□□ -1.64
PKP4Q99569 AC233702.9-201ENST00000581528 203 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 VN1R87P-201ENST00000596706 487 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AF230666.2-201ENST00000602328 725 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC133552.5-201ENST00000604266 540 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC015849.2-201ENST00000605738 409 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.8□□□□□ -1.64
PKP4Q99569 AP005229.2-201ENST00000609980 697 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 RNU6-1192P-201ENST00000612197 107 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 RNU6-489P-201ENST00000618289 107 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.8□□□□□ -1.64
PKP4Q99569 AP000676.4-201ENST00000624659 623 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 AC126544.2-201ENST00000625174 749 ntBASIC4.8□□□□□ -1.64
PKP4Q99569 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PKP4Q99569 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PKP4Q99569 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
PKP4Q99569 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.8□□□□□ -1.64
PKP4Q99569 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PKP4Q99569 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.79□□□□□ -1.64
PKP4Q99569 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKP4Q99569 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKP4Q99569 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PKP4Q99569 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKP4Q99569 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PKP4Q99569 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PKP4Q99569 AC011155.1-201ENST00000316512 456 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PKP4Q99569 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.79□□□□□ -1.64
PKP4Q99569 MIR16-2-201ENST00000362117 81 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 RNU5E-10P-201ENST00000363506 118 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKP4Q99569 SNORA70-201ENST00000384436 135 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 MIR105-2-201ENST00000385083 81 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKP4Q99569 AL021331.1-201ENST00000402817 582 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 CTSL3P-202ENST00000412179 788 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 CHEK2P3-201ENST00000416118 248 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 TCEA1P2-201ENST00000420496 906 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 ARL2BPP3-201ENST00000421226 480 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PKP4Q99569 RPS24P8-201ENST00000431490 402 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.79□□□□□ -1.64
PKP4Q99569 PTMAP6-201ENST00000439110 327 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.79□□□□□ -1.64
PKP4Q99569 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.79□□□□□ -1.64
PKP4Q99569 Z77249.1-201ENST00000444622 1175 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PKP4Q99569 RPL34P26-201ENST00000445636 354 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AL096829.2-201ENST00000446582 742 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC012512.1-201ENST00000446594 718 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 BTF3P6-201ENST00000448054 499 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.79□□□□□ -1.64
PKP4Q99569 TRY2P-201ENST00000448860 689 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AL009048.1-201ENST00000450437 298 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 RPL7P48-201ENST00000461513 746 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.79□□□□□ -1.64
PKP4Q99569 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.79□□□□□ -1.64
PKP4Q99569 RN7SL97P-201ENST00000486780 299 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC082651.2-201ENST00000496833 166 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 PPM1AP1-201ENST00000502740 1135 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.79□□□□□ -1.64
PKP4Q99569 MTCO1P31-201ENST00000506355 492 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKP4Q99569 AC112518.2-201ENST00000508565 425 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC119751.5-201ENST00000514077 770 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AP006245.2-201ENST00000522004 300 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 SMARCE1P4-201ENST00000523647 241 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.79□□□□□ -1.64
PKP4Q99569 OR8A2P-201ENST00000528631 952 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 DUXAP5-201ENST00000529668 529 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC023538.1-201ENST00000534576 736 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC087894.1-201ENST00000538359 518 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 PDCD5P1-201ENST00000543528 309 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.79□□□□□ -1.64
PKP4Q99569 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.79□□□□□ -1.64
PKP4Q99569 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.79□□□□□ -1.64
PKP4Q99569 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.79□□□□□ -1.64
PKP4Q99569 AC090888.2-201ENST00000559765 1144 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC044860.2-201ENST00000561005 179 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.79□□□□□ -1.64
PKP4Q99569 AP001160.4-201ENST00000596971 382 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.79□□□□□ -1.64
PKP4Q99569 RPP40P2-201ENST00000603596 712 ntBASIC4.79□□□□□ -1.64
PKP4Q99569 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.79□□□□□ -1.64
PKP4Q99569 AC084782.3-201ENST00000612282 578 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms