Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.71□□□□□ -1.49
CDK5RAP1Q96SZ6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.71□□□□□ -1.49
CDK5RAP1Q96SZ6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDK5RAP1Q96SZ6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CDK5RAP1Q96SZ6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CDK5RAP1Q96SZ6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CDK5RAP1Q96SZ6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 Y_RNA.70-201ENST00000362886 110 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 RNU4-51P-201ENST00000364206 140 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 RNU6-157P-201ENST00000383957 107 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 ATP5F1P4-201ENST00000397288 746 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 TATDN1P1-201ENST00000414123 891 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 BTF3P8-201ENST00000414577 526 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC245052.5-201ENST00000416320 649 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 SLC35E1P1-201ENST00000419313 864 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 EIF1P1-201ENST00000421436 341 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL034379.1-201ENST00000423216 253 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 MTND1P2-201ENST00000430604 821 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL163193.1-201ENST00000444895 788 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 CDC27P1-201ENST00000445384 715 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL592447.1-201ENST00000447592 540 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 MTND6P5-201ENST00000448266 512 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL606490.1-201ENST00000452266 765 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 MTND2P24-201ENST00000453434 806 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AZGP1P2-201ENST00000454506 345 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AMD1P1-201ENST00000457220 922 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC011225.1-201ENST00000457751 369 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 RNU6-956P-201ENST00000458868 103 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC074386.1-201ENST00000476560 767 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 RN7SL629P-201ENST00000489622 285 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC021146.7-201ENST00000509604 775 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 KRT19P6-201ENST00000510983 209 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 DUXAP2-201ENST00000519198 589 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 IGLV2-28-201ENST00000520681 304 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC136777.2-201ENST00000522979 358 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 HMGB1P40-201ENST00000525121 540 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC005341.1-201ENST00000571086 708 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC025857.2-201ENST00000602711 238 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL392112.1-201ENST00000605115 829 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL451074.6-201ENST00000608512 729 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC007684.1-201ENST00000609671 477 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC010678.1-201ENST00000614118 713 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC016769.4-201ENST00000616893 535 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 uc_338.7-201ENST00000621834 124 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC015660.5-201ENST00000623238 564 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC079776.5-201ENST00000641920 211 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL356317.1-201ENST00000396110 1436 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 RARSP1-201ENST00000542842 1418 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AL359955.1-201ENST00000455242 3275 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 AC144833.1-201ENST00000567953 4089 ntBASIC5.71□□□□□ -1.5
CDK5RAP1Q96SZ6 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 AC007938.2-201ENST00000604666 2634 ntBASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 U3.4-201ENST00000363352 213 ntBASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 RNA5SP335-201ENST00000363817 110 ntBASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP1Q96SZ6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms