Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 RNA5SP43-201ENST00000516559 110 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 snoU109.6-201ENST00000516831 118 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 snoZ278.1-201ENST00000517059 112 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 UBE2FP2-201ENST00000566646 462 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC234771.5-201ENST00000600161 514 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC009237.15-201ENST00000610252 501 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB4Q8WW32 MAPK10-263ENST00000641052 4307 ntBASIC5.14□□□□□ -1.59
HMGB4Q8WW32 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 MUC2-202ENST00000613187 4845 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 MAPK10-328ENST00000641553 4009 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 SDAD1P1-202ENST00000524156 2051 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 MIR133A2-201ENST00000347538 102 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 MIR513B-201ENST00000385136 84 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 RNU2-50P-201ENST00000410494 143 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC009506.2-201ENST00000420635 840 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AL513175.2-201ENST00000422071 443 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 OR5AW1P-201ENST00000426334 1006 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC090018.1-201ENST00000434369 367 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC073052.1-201ENST00000440417 714 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 OR52J1P-201ENST00000450596 932 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 RN7SL481P-201ENST00000477764 299 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC093267.1-201ENST00000489176 961 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC005912.1-201ENST00000495392 255 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC010627.1-201ENST00000503819 1294 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 GLUD1P3-202ENST00000508551 200 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC026782.2-201ENST00000510845 636 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 RPS27AP18-201ENST00000515536 459 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 HMGB1P23-201ENST00000518743 568 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC022360.1-201ENST00000521058 340 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 OR8Q1P-201ENST00000526467 655 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 OR8A2P-201ENST00000528631 952 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 OR5AN2P-201ENST00000534535 896 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC139103.1-201ENST00000534696 1030 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 GCSHP4-201ENST00000538792 439 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 MIR3667-201ENST00000581025 74 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 VN1R88P-201ENST00000596787 292 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC113368.1-201ENST00000603736 382 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AL357094.1-201ENST00000603845 844 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC008745.1-201ENST00000604064 271 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC139769.3-201ENST00000618383 175 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC011330.2-201ENST00000621680 635 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC109454.4-201ENST00000623411 649 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 OR1S1-201ENST00000624470 978 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms