Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SOX5P1-201ENST00000524155 1127 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 NPM1P47-201ENST00000560843 856 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 AC005084.1-201ENST00000605160 304 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 AC008966.2-201ENST00000606157 453 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 MIR1264-201ENST00000616374 69 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 uc_338.9-201ENST00000617424 182 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 AC090510.2-201ENST00000617465 629 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 AC087385.3-201ENST00000620477 187 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 OR51H2P-202ENST00000641424 3046 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 DDX18P4-201ENST00000511690 1966 ntBASIC4.82□□□□□ -1.64
TRAF3IP1Q8TDR0 AC131971.1-201ENST00000332881 1482 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC010300.1-201ENST00000600671 5134 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 SNORA71.2-201ENST00000364941 134 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 HMGB1P10-201ENST00000395823 563 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC010385.1-201ENST00000412374 256 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 RSU1P3-201ENST00000412878 835 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 BX510359.2-201ENST00000417920 305 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC073508.1-201ENST00000428866 656 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 PPIAP13-201ENST00000434706 478 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 RPL23AP23-201ENST00000452590 471 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC005229.2-201ENST00000456995 399 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC108729.2-201ENST00000476543 840 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC005912.1-201ENST00000495392 255 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 RNU2-30P-201ENST00000516209 141 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 IGKV2D-10-201ENST00000520194 281 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC090819.1-201ENST00000523800 1111 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 PCNPP1-201ENST00000552501 511 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 OR1F2P-201ENST00000570470 933 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 HMGB2P1-201ENST00000591146 634 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC123786.2-201ENST00000603459 275 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC024023.1-201ENST00000624530 922 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AC108467.2-201ENST00000617640 1597 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.81□□□□□ -1.64
TRAF3IP1Q8TDR0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AP000756.2-201ENST00000624168 2567 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 RNU6-984P-201ENST00000363236 109 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 RNU6-452P-201ENST00000384406 107 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 SNORD96B-201ENST00000386148 79 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 RNU2-17P-201ENST00000410290 190 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC140479.3-201ENST00000418944 1126 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AL358176.3-201ENST00000420757 454 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 RPL21P43-201ENST00000425440 472 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC074367.1-201ENST00000438685 1125 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 PTMAP6-201ENST00000439110 327 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC091685.2-201ENST00000454924 864 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 RPL5P30-201ENST00000465511 891 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC104763.1-201ENST00000475274 360 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 RPS27AP16-201ENST00000492222 470 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 NDUFB5P1-201ENST00000508134 564 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 RN7SKP141-201ENST00000516167 338 ntBASIC4.8□□□□□ -1.64
TRAF3IP1Q8TDR0 SNORA76.2-201ENST00000517095 137 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms