Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 BIN2P1-201ENST00000504996 1530 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 ZNF402P-201ENST00000404435 3100 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 AC119674.1-202ENST00000641333 1860 ntBASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHKBP1Q8TBC3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 MARK2P4-201ENST00000503381 2380 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 RNU6-877P-201ENST00000383868 107 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 SNORA70H-201ENST00000383910 135 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 SNORA70J-201ENST00000384182 135 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 OR7E101P-201ENST00000400428 513 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC010385.1-201ENST00000412374 256 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 USP9YP27-201ENST00000418455 438 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 CYP4F30P-202ENST00000420048 405 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC092647.1-201ENST00000420654 287 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 BX284632.2-201ENST00000421091 399 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AL353729.1-201ENST00000425044 720 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 BX323845.3-201ENST00000428215 527 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC002542.1-201ENST00000440683 193 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AL512605.1-202ENST00000441919 381 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AL359955.2-201ENST00000445380 353 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC022364.2-201ENST00000457963 554 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 RN7SL165P-201ENST00000477476 291 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC092865.4-201ENST00000477936 615 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AP000797.1-201ENST00000478870 387 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 RNU6-430P-201ENST00000517078 107 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC008802.1-201ENST00000519121 791 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 OR5AN2P-201ENST00000534535 896 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 MIR3668-201ENST00000582138 75 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC010487.1-201ENST00000594408 1172 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 BMS1P7-201ENST00000602440 1052 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AP005137.2-201ENST00000609238 400 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 TCL6_3.1-201ENST00000619064 137 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AL137067.2-201ENST00000621202 131 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 YWHAEP7-203ENST00000622054 312 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 MIR3662-201ENST00000637030 95 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 MIR1321-201ENST00000637766 79 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC110716.2-201ENST00000563865 3945 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 AC024587.1-201ENST00000505925 2157 ntBASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.38□□□□□ -1.39
SHKBP1Q8TBC3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AC114786.1-201ENST00000512892 1415 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 FAM32BP-201ENST00000344033 333 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms