Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AL592437.1-201ENST00000443781 492 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 ARL5AP2-201ENST00000444698 533 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AL050341.1-201ENST00000447743 313 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 BX842559.2-201ENST00000451418 605 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC104417.1-201ENST00000523974 751 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AP002812.4-201ENST00000532139 286 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 LRRC6P1-201ENST00000532188 885 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC027369.5-201ENST00000533838 755 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC006518.2-201ENST00000542513 940 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AL132857.1-201ENST00000555180 708 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC006272.2-201ENST00000594725 163 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 ZNF92P3-201ENST00000596594 954 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AL160237.3-201ENST00000604114 1013 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC005377.1-201ENST00000605126 456 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC112220.2-201ENST00000605513 533 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 MIR6820-201ENST00000611508 62 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC006927.4-201ENST00000639187 543 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
BEST3Q8N1M1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 DDX18P4-201ENST00000511690 1966 ntBASIC4.64□□□□□ -1.67
BEST3Q8N1M1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AP001642.1-201ENST00000624727 2117 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AL021331.1-201ENST00000402817 582 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 SNORA77-201ENST00000408716 125 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 RN7SKP216-201ENST00000411050 312 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 RPL12P9-201ENST00000412942 488 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AF186996.5-201ENST00000418098 904 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC009238.2-201ENST00000431026 355 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 CYCSP24-201ENST00000445119 316 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 MRPL35P2-201ENST00000448009 511 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC104108.1-201ENST00000509930 412 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC108471.1-201ENST00000513977 287 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC100784.1-201ENST00000522790 310 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 OR8I1P-201ENST00000529291 931 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 OR8K4P-201ENST00000534608 872 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC087897.1-201ENST00000550134 156 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC027455.1-201ENST00000574104 594 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AP005262.1-201ENST00000582646 997 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC104985.3-201ENST00000623479 597 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AL109659.3-201ENST00000624985 950 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AL137100.1-201ENST00000556703 1620 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 HSPA8P17-201ENST00000427029 1382 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AC100778.3-201ENST00000580060 1750 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.63□□□□□ -1.67
BEST3Q8N1M1 LINC01355-201ENST00000566551 5444 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 AP000542.2-201ENST00000623199 6179 ntBASIC4.63□□□□□ -1.67
BEST3Q8N1M1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms