Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AL512782.1-201ENST00000603093 364 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 SDR42E1P1-201ENST00000611327 477 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 CYP1D1P-201ENST00000416662 1433 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 AC092079.1-201ENST00000558620 1985 ntBASIC4.34□□□□□ -1.71
NUDCD3Q8IVD9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
NUDCD3Q8IVD9 AC097504.1-201ENST00000515103 2415 ntBASIC4.34□□□□□ -1.72
NUDCD3Q8IVD9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
NUDCD3Q8IVD9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC012020.1-201ENST00000624541 1728 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC110792.3-201ENST00000595906 1614 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AL590240.1-201ENST00000334118 313 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 SNORD66.1-201ENST00000391230 76 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 MIR1178-201ENST00000408396 91 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 RBMY1KP-201ENST00000423480 476 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AP001324.1-201ENST00000428553 399 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 PA2G4P6-201ENST00000438325 1197 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 RAD1P2-201ENST00000446414 663 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 BUD31P2-201ENST00000449374 300 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC004815.1-201ENST00000484185 331 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 VWA8P1-201ENST00000510889 176 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 MIR3667-201ENST00000581025 74 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC020915.5-201ENST00000596836 964 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC098935.2-201ENST00000604222 466 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 AC068254.2-201ENST00000623938 3577 ntBASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUDCD3Q8IVD9 CR788268.1-201ENST00000603931 1809 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 RNU6-564P-201ENST00000410983 104 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 RN7SKP100-201ENST00000411258 284 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 RPL6P29-201ENST00000414863 865 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 COX6B1P1-201ENST00000415962 213 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 BX119904.1-201ENST00000432026 348 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 YWHAZP2-201ENST00000440317 728 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 CEACAMP7-201ENST00000444105 496 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 RN7SL585P-201ENST00000470538 280 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 RPL7P16-201ENST00000479738 738 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 OR5AZ1P-201ENST00000527448 943 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC087888.1-201ENST00000550884 1254 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 HMGN2P6-201ENST00000551091 273 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AL352979.3-201ENST00000553515 247 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 EDDM3DP-201ENST00000554692 434 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC009117.1-201ENST00000563948 554 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 BNIP3P7-201ENST00000605641 516 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC012603.1-201ENST00000606424 528 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC020634.1-201ENST00000608701 549 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC116447.1-201ENST00000613153 453 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms