Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LAMA3Q16787 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LAMA3Q16787 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LAMA3Q16787 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.27□□□□□ -1.73
LAMA3Q16787 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LAMA3Q16787 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LAMA3Q16787 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LAMA3Q16787 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LAMA3Q16787 RNA5SP374-201ENST00000362939 125 ntBASIC4.27□□□□□ -1.73
LAMA3Q16787 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.27□□□□□ -1.73
LAMA3Q16787 AC105031.1-201ENST00000518550 476 ntBASIC4.27□□□□□ -1.73
LAMA3Q16787 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.27□□□□□ -1.73
LAMA3Q16787 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LAMA3Q16787 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LAMA3Q16787 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LAMA3Q16787 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LAMA3Q16787 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.26□□□□□ -1.73
LAMA3Q16787 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC4.26□□□□□ -1.73
LAMA3Q16787 RPL23AP57-201ENST00000332361 466 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 OOSP1P1-201ENST00000423265 274 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 EIF1P3-201ENST00000423841 334 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 AC004938.1-201ENST00000438468 308 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 RPL23AP46-201ENST00000438548 490 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 AL831737.1-201ENST00000441288 271 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.26□□□□□ -1.73
LAMA3Q16787 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.26□□□□□ -1.73
LAMA3Q16787 AC068790.5-201ENST00000602741 355 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LAMA3Q16787 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LAMA3Q16787 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LAMA3Q16787 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LAMA3Q16787 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LAMA3Q16787 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LAMA3Q16787 RNA5SP120-201ENST00000410900 112 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 AC091178.1-203ENST00000584586 279 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.26□□□□□ -1.73
LAMA3Q16787 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC4.26□□□□□ -1.73
LAMA3Q16787 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.26□□□□□ -1.73
LAMA3Q16787 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LAMA3Q16787 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LAMA3Q16787 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LAMA3Q16787 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LAMA3Q16787 RPL38P1-201ENST00000460914 211 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.26□□□□□ -1.73
LAMA3Q16787 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LAMA3Q16787 CDY3P-201ENST00000454543 1618 ntBASIC4.25□□□□□ -1.73
LAMA3Q16787 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.25□□□□□ -1.73
LAMA3Q16787 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.25□□□□□ -1.73
LAMA3Q16787 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.25□□□□□ -1.73
LAMA3Q16787 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.25□□□□□ -1.73
LAMA3Q16787 Vault.1-201ENST00000516474 102 ntBASIC4.25□□□□□ -1.73
LAMA3Q16787 RPL23AP97-201ENST00000568955 471 ntBASIC4.25□□□□□ -1.73
LAMA3Q16787 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.25□□□□□ -1.73
LAMA3Q16787 AC243654.2-201ENST00000612843 443 ntBASIC4.25□□□□□ -1.73
LAMA3Q16787 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.25□□□□□ -1.73
LAMA3Q16787 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.25□□□□□ -1.73
LAMA3Q16787 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LAMA3Q16787 AC123769.2-201ENST00000624332 5984 ntBASIC4.25□□□□□ -1.73
LAMA3Q16787 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 SNORA60-201ENST00000362396 134 ntBASIC4.25□□□□□ -1.73
LAMA3Q16787 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 RPS29P4-201ENST00000414733 161 ntBASIC4.25□□□□□ -1.73
LAMA3Q16787 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.25□□□□□ -1.73
LAMA3Q16787 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.25□□□□□ -1.73
LAMA3Q16787 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 AC093591.2-201ENST00000565254 3843 ntBASIC4.25□□□□□ -1.73
LAMA3Q16787 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC4.25□□□□□ -1.73
LAMA3Q16787 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
LAMA3Q16787 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 AC125257.1-201ENST00000560400 2930 ntBASIC4.25□□□□□ -1.73
LAMA3Q16787 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LAMA3Q16787 AC021876.1-201ENST00000425959 359 ntBASIC4.24□□□□□ -1.73
LAMA3Q16787 CCRL1P1-201ENST00000449542 1053 ntBASIC4.24□□□□□ -1.73
LAMA3Q16787 CYCSP35-201ENST00000451978 304 ntBASIC4.24□□□□□ -1.73
LAMA3Q16787 AC010285.3-201ENST00000511668 676 ntBASIC4.24□□□□□ -1.73
LAMA3Q16787 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.24□□□□□ -1.73
LAMA3Q16787 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.24□□□□□ -1.73
LAMA3Q16787 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LAMA3Q16787 AL353726.1-201ENST00000614041 1000 ntBASIC4.24□□□□□ -1.73
LAMA3Q16787 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.24□□□□□ -1.73
LAMA3Q16787 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.24□□□□□ -1.73
LAMA3Q16787 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LAMA3Q16787 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LAMA3Q16787 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
LAMA3Q16787 AP003972.1-201ENST00000625192 5446 ntBASIC4.24□□□□□ -1.73
LAMA3Q16787 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LAMA3Q16787 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LAMA3Q16787 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LAMA3Q16787 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.24□□□□□ -1.73
LAMA3Q16787 HMGB3P19-201ENST00000403971 560 ntBASIC4.24□□□□□ -1.73
LAMA3Q16787 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.24□□□□□ -1.73
LAMA3Q16787 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.24□□□□□ -1.73
LAMA3Q16787 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms