Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.08□□□□□ -1.6
GABPAQ06546 AC090013.1-201ENST00000485147 480 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.08□□□□□ -1.6
GABPAQ06546 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.08□□□□□ -1.6
GABPAQ06546 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
GABPAQ06546 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
GABPAQ06546 AC099522.1-202ENST00000514718 367 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.08□□□□□ -1.6
GABPAQ06546 AC008126.1-201ENST00000549019 480 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 BNIP3P5-201ENST00000562290 498 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.08□□□□□ -1.6
GABPAQ06546 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.08□□□□□ -1.6
GABPAQ06546 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.08□□□□□ -1.6
GABPAQ06546 AC100814.1-201ENST00000606963 623 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 AC023043.4-201ENST00000612081 449 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
GABPAQ06546 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 AC005086.4-201ENST00000623065 213 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 AC090506.2-201ENST00000624521 419 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.08□□□□□ -1.6
GABPAQ06546 AC008013.2-202ENST00000637965 364 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 AL133243.3-201ENST00000617415 3004 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABPAQ06546 A2MP1-204ENST00000566278 4130 ntBASIC5.08□□□□□ -1.6
GABPAQ06546 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.07□□□□□ -1.6
GABPAQ06546 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.07□□□□□ -1.6
GABPAQ06546 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.07□□□□□ -1.6
GABPAQ06546 AC104260.2-201ENST00000623551 3497 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 RNU1-94P-201ENST00000362627 173 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 RNU6-249P-201ENST00000363016 102 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 RNU1-20P-201ENST00000363314 162 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 RNU6-670P-201ENST00000364312 104 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
GABPAQ06546 RN7SKP33-201ENST00000410942 340 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 TRIM60P17-201ENST00000415181 719 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.07□□□□□ -1.6
GABPAQ06546 AL356095.1-201ENST00000417217 199 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 RPL23AP38-201ENST00000423801 469 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 RPL23AP25-201ENST00000430973 463 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 AL132765.1-201ENST00000434165 553 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 RPL23AP81-201ENST00000455252 467 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 RPS7P7-201ENST00000463499 571 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 AL591473.1-201ENST00000464297 313 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 AC022336.1-201ENST00000475510 337 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.07□□□□□ -1.6
GABPAQ06546 SEC11B-201ENST00000518383 499 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 AC027281.1-201ENST00000574178 758 ntBASIC5.07□□□□□ -1.6
GABPAQ06546 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.07□□□□□ -1.6
GABPAQ06546 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.07□□□□□ -1.6
GABPAQ06546 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.07□□□□□ -1.6
GABPAQ06546 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.07□□□□□ -1.6
GABPAQ06546 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.07□□□□□ -1.6
GABPAQ06546 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.07□□□□□ -1.6
GABPAQ06546 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
GABPAQ06546 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
GABPAQ06546 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GABPAQ06546 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GABPAQ06546 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GABPAQ06546 AC245100.2-201ENST00000454544 1679 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.06□□□□□ -1.6
GABPAQ06546 OR13C3-201ENST00000374781 1108 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 SNORA57.1-201ENST00000391227 145 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 AL078604.1-201ENST00000404609 466 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 RN7SKP263-201ENST00000411194 309 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.06□□□□□ -1.6
GABPAQ06546 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.06□□□□□ -1.6
GABPAQ06546 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.06□□□□□ -1.6
GABPAQ06546 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.06□□□□□ -1.6
GABPAQ06546 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.06□□□□□ -1.6
GABPAQ06546 RPL7P22-201ENST00000466005 733 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.06□□□□□ -1.6
GABPAQ06546 OR9N1P-201ENST00000491296 333 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 PGBD4P4-201ENST00000509673 613 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 AC117525.1-201ENST00000515228 503 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 RNU6-319P-201ENST00000516025 108 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.06□□□□□ -1.6
GABPAQ06546 AC090151.1-201ENST00000520784 730 ntBASIC5.06□□□□□ -1.6
GABPAQ06546 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.06□□□□□ -1.6
GABPAQ06546 AL352979.3-201ENST00000553515 247 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms