Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
AP1S1P61966 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
AP1S1P61966 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
AP1S1P61966 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
AP1S1P61966 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
AP1S1P61966 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
AP1S1P61966 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
AP1S1P61966 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S1P61966 NOL8P1-201ENST00000508336 3529 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S1P61966 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S1P61966 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
AP1S1P61966 CCT8P1-201ENST00000413611 1657 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
AP1S1P61966 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S1P61966 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S1P61966 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S1P61966 AC126755.2-208ENST00000327792 462 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
AP1S1P61966 AC138969.1-213ENST00000331436 462 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 RNU1-14P-201ENST00000362759 152 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 RNU6-984P-201ENST00000363236 109 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 RNU1-132P-201ENST00000364300 164 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 SNORD66.1-201ENST00000391230 76 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 OR6C69P-201ENST00000394268 893 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 HDGFP1-201ENST00000405943 252 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 RPL23AP26-201ENST00000412728 464 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 RPL6P29-201ENST00000414863 865 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 SKP1P3-201ENST00000429280 487 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S1P61966 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S1P61966 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S1P61966 AC239798.3-201ENST00000454459 408 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.33□□□□□ -1.72
AP1S1P61966 APOOP2-201ENST00000461561 539 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 UQCRHP4-201ENST00000471686 272 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 AC104164.2-201ENST00000496953 495 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.33□□□□□ -1.72
AP1S1P61966 HPRT1P1-201ENST00000509498 657 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 PGBD4P4-201ENST00000509673 613 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S1P61966 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S1P61966 RNA5SP49-201ENST00000516450 115 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.33□□□□□ -1.72
AP1S1P61966 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S1P61966 GLRXP2-201ENST00000555594 321 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.33□□□□□ -1.72
AP1S1P61966 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.33□□□□□ -1.72
AP1S1P61966 IPO5P1-202ENST00000600039 287 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S1P61966 AC005229.3-201ENST00000603438 323 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.33□□□□□ -1.72
AP1S1P61966 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
AP1S1P61966 AL445363.3-201ENST00000623080 671 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
AP1S1P61966 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S1P61966 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
AP1S1P61966 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
AP1S1P61966 AP000756.2-201ENST00000624168 2567 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.33□□□□□ -1.72
AP1S1P61966 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
AP1S1P61966 AC087190.4-201ENST00000574616 8334 ntBASIC4.33□□□□□ -1.72
AP1S1P61966 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP1S1P61966 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
AP1S1P61966 AC245100.2-201ENST00000454544 1679 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
AP1S1P61966 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
AP1S1P61966 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S1P61966 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
AP1S1P61966 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S1P61966 IL6STP1-201ENST00000346911 1020 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 SNORA62-201ENST00000365493 153 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S1P61966 RNU6-729P-201ENST00000384399 107 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 MIR1179-201ENST00000408703 91 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 RN7SKP235-201ENST00000410662 305 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 AL356968.2-201ENST00000412769 1257 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 NRBF2P2-201ENST00000413087 861 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.32□□□□□ -1.72
AP1S1P61966 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S1P61966 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S1P61966 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S1P61966 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S1P61966 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.32□□□□□ -1.72
AP1S1P61966 RPS23P7-201ENST00000466210 444 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 AC041039.1-201ENST00000485656 536 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 AC091167.1-201ENST00000492017 396 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.32□□□□□ -1.72
AP1S1P61966 PARP4P3-201ENST00000510265 317 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.32□□□□□ -1.72
AP1S1P61966 AC023575.1-201ENST00000580510 358 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 AC026979.4-201ENST00000606555 645 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
AP1S1P61966 MIR3653-201ENST00000625572 110 ntBASIC4.32□□□□□ -1.72
AP1S1P61966 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.32□□□□□ -1.72
AP1S1P61966 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.32□□□□□ -1.72
AP1S1P61966 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
AP1S1P61966 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP1S1P61966 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
AP1S1P61966 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms