Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SNORD65-201ENST00000391079 73 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PKNOX1P55347 ST13P16-201ENST00000401760 781 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 AL356806.1-201ENST00000422524 916 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 AC104837.2-201ENST00000427236 424 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 PRELID3BP10-201ENST00000431957 584 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PKNOX1P55347 UBE2V1P3-201ENST00000439651 417 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 AC114495.1-201ENST00000441274 436 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.29□□□□□ -1.72
PKNOX1P55347 AL162388.1-201ENST00000450912 352 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 RPS27AP17-201ENST00000463344 455 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.29□□□□□ -1.72
PKNOX1P55347 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PKNOX1P55347 PPM1AP1-201ENST00000502740 1135 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 SNORA70.17-201ENST00000516449 133 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.29□□□□□ -1.72
PKNOX1P55347 AP000827.1-201ENST00000527814 258 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.29□□□□□ -1.72
PKNOX1P55347 OR1F2P-201ENST00000570470 933 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 AC022387.2-201ENST00000604050 448 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 MIR6891-201ENST00000618788 93 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
PKNOX1P55347 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PKNOX1P55347 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PKNOX1P55347 AC018529.3-201ENST00000624212 2254 ntBASIC4.29□□□□□ -1.72
PKNOX1P55347 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.29□□□□□ -1.72
PKNOX1P55347 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PKNOX1P55347 ZNF962P-201ENST00000443465 3140 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PKNOX1P55347 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKNOX1P55347 AC074029.4-201ENST00000624796 1859 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKNOX1P55347 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PKNOX1P55347 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.72
PKNOX1P55347 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKNOX1P55347 MIR659-201ENST00000384963 97 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 LAP3P1-201ENST00000403648 294 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 MIR1911-201ENST00000410783 80 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 RNA5SP104-201ENST00000410989 118 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 RPS20P14-201ENST00000412545 360 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 RPS23P10-201ENST00000416185 486 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.28□□□□□ -1.72
PKNOX1P55347 RPS26P13-201ENST00000419030 330 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.28□□□□□ -1.72
PKNOX1P55347 RPEP2-201ENST00000432149 701 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 PTMAP6-201ENST00000439110 327 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AL353748.1-201ENST00000440753 474 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AL606490.8-201ENST00000441624 319 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.28□□□□□ -1.72
PKNOX1P55347 AC099063.2-201ENST00000446360 662 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 ABCF2P2-201ENST00000450549 296 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AC243772.1-201ENST00000451620 410 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 FGF7P3-201ENST00000454645 303 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AC092324.1-201ENST00000468671 324 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AC074386.1-201ENST00000476560 767 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 RN7SL812P-201ENST00000493791 279 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PKNOX1P55347 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.28□□□□□ -1.72
PKNOX1P55347 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.28□□□□□ -1.72
PKNOX1P55347 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.28□□□□□ -1.72
PKNOX1P55347 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.28□□□□□ -1.72
PKNOX1P55347 AC087888.1-201ENST00000550884 1254 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AC044860.2-201ENST00000561005 179 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.28□□□□□ -1.72
PKNOX1P55347 RN7SL753P-201ENST00000581238 290 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.28□□□□□ -1.72
PKNOX1P55347 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.28□□□□□ -1.72
PKNOX1P55347 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.28□□□□□ -1.72
PKNOX1P55347 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.28□□□□□ -1.72
PKNOX1P55347 BMS1P7-201ENST00000602440 1052 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AC005034.4-201ENST00000603612 899 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AL133243.1-201ENST00000614487 366 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AC090510.2-201ENST00000617465 629 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.28□□□□□ -1.72
PKNOX1P55347 AC019278.1-201ENST00000623516 479 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 AC092159.4-201ENST00000624944 550 ntBASIC4.28□□□□□ -1.72
PKNOX1P55347 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.28□□□□□ -1.72
PKNOX1P55347 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKNOX1P55347 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PKNOX1P55347 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKNOX1P55347 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PKNOX1P55347 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.28□□□□□ -1.72
PKNOX1P55347 NOL8P1-201ENST00000508336 3529 ntBASIC4.28□□□□□ -1.73
PKNOX1P55347 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 AC092079.1-201ENST00000558620 1985 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.27□□□□□ -1.73
PKNOX1P55347 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.27□□□□□ -1.73
PKNOX1P55347 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 SPATA2P1-201ENST00000431223 2055 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PKNOX1P55347 GLULP6-201ENST00000399502 913 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AL049697.2-201ENST00000403708 294 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 RN7SKP106-201ENST00000410832 272 ntBASIC4.27□□□□□ -1.73
PKNOX1P55347 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms