Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MFSD8-242ENST00000641690 4199 ntBASIC4.2□□□□□ -1.74
LIM2P55344 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
LIM2P55344 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.2□□□□□ -1.74
LIM2P55344 AC005332.5-201ENST00000591222 2919 ntBASIC4.2□□□□□ -1.74
LIM2P55344 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
LIM2P55344 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LIM2P55344 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LIM2P55344 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LIM2P55344 RNA5SP307-201ENST00000362863 116 ntBASIC4.19□□□□□ -1.74
LIM2P55344 CCNB2P1-201ENST00000399411 1150 ntBASIC4.19□□□□□ -1.74
LIM2P55344 RPL23AP59-201ENST00000399415 461 ntBASIC4.19□□□□□ -1.74
LIM2P55344 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LIM2P55344 TMSB10P2-201ENST00000416049 131 ntBASIC4.19□□□□□ -1.74
LIM2P55344 RPS27AP7-201ENST00000422792 455 ntBASIC4.19□□□□□ -1.74
LIM2P55344 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.19□□□□□ -1.74
LIM2P55344 UBE2V1P3-201ENST00000439651 417 ntBASIC4.19□□□□□ -1.74
LIM2P55344 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.19□□□□□ -1.74
LIM2P55344 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.19□□□□□ -1.74
LIM2P55344 RPS15AP29-201ENST00000445539 400 ntBASIC4.19□□□□□ -1.74
LIM2P55344 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.19□□□□□ -1.74
LIM2P55344 snoU13.1-201ENST00000459157 104 ntBASIC4.19□□□□□ -1.74
LIM2P55344 RPL5P13-201ENST00000462840 709 ntBASIC4.19□□□□□ -1.74
LIM2P55344 RPL7AP10-201ENST00000481016 791 ntBASIC4.19□□□□□ -1.74
LIM2P55344 RN7SL459P-201ENST00000481078 302 ntBASIC4.19□□□□□ -1.74
LIM2P55344 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.19□□□□□ -1.74
LIM2P55344 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.19□□□□□ -1.74
LIM2P55344 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.19□□□□□ -1.74
LIM2P55344 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LIM2P55344 AL731537.2-201ENST00000561565 951 ntBASIC4.19□□□□□ -1.74
LIM2P55344 AC008759.1-201ENST00000589783 983 ntBASIC4.19□□□□□ -1.74
LIM2P55344 AL160290.3-201ENST00000604869 165 ntBASIC4.19□□□□□ -1.74
LIM2P55344 AL354696.1-201ENST00000614652 497 ntBASIC4.19□□□□□ -1.74
LIM2P55344 MIR7154-201ENST00000620673 73 ntBASIC4.19□□□□□ -1.74
LIM2P55344 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.19□□□□□ -1.74
LIM2P55344 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.19□□□□□ -1.74
LIM2P55344 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LIM2P55344 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
LIM2P55344 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LIM2P55344 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.19□□□□□ -1.74
LIM2P55344 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LIM2P55344 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.18□□□□□ -1.74
LIM2P55344 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
LIM2P55344 AC010329.2-201ENST00000595195 2737 ntBASIC4.18□□□□□ -1.74
LIM2P55344 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 CASC19-284ENST00000642142 1868 ntBASIC4.18□□□□□ -1.74
LIM2P55344 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.18□□□□□ -1.74
LIM2P55344 LINC01355-201ENST00000566551 5444 ntBASIC4.18□□□□□ -1.74
LIM2P55344 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 RNU1-44P-201ENST00000384453 163 ntBASIC4.18□□□□□ -1.74
LIM2P55344 MIR3065-201ENST00000390137 79 ntBASIC4.18□□□□□ -1.74
LIM2P55344 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LIM2P55344 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.18□□□□□ -1.74
LIM2P55344 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.18□□□□□ -1.74
LIM2P55344 RPS20P14-201ENST00000412545 360 ntBASIC4.18□□□□□ -1.74
LIM2P55344 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.18□□□□□ -1.74
LIM2P55344 MTCYBP12-201ENST00000440559 1134 ntBASIC4.18□□□□□ -1.74
LIM2P55344 AL035551.1-201ENST00000446931 348 ntBASIC4.18□□□□□ -1.74
LIM2P55344 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 DHFRP3-201ENST00000455595 559 ntBASIC4.18□□□□□ -1.74
LIM2P55344 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.18□□□□□ -1.74
LIM2P55344 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.18□□□□□ -1.74
LIM2P55344 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.18□□□□□ -1.74
LIM2P55344 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.18□□□□□ -1.74
LIM2P55344 AC021087.2-201ENST00000504656 1203 ntBASIC4.18□□□□□ -1.74
LIM2P55344 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.18□□□□□ -1.74
LIM2P55344 IGLVIV-65-201ENST00000517313 360 ntBASIC4.18□□□□□ -1.74
LIM2P55344 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.18□□□□□ -1.74
LIM2P55344 AC134698.5-201ENST00000519444 336 ntBASIC4.18□□□□□ -1.74
LIM2P55344 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.18□□□□□ -1.74
LIM2P55344 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.18□□□□□ -1.74
LIM2P55344 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LIM2P55344 AC068790.4-201ENST00000602474 263 ntBASIC4.18□□□□□ -1.74
LIM2P55344 AC008745.1-201ENST00000604064 271 ntBASIC4.18□□□□□ -1.74
LIM2P55344 AL021368.1-201ENST00000607490 540 ntBASIC4.18□□□□□ -1.74
LIM2P55344 AC003001.2-201ENST00000616294 831 ntBASIC4.18□□□□□ -1.74
LIM2P55344 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.18□□□□□ -1.74
LIM2P55344 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.18□□□□□ -1.74
LIM2P55344 AC007546.2-201ENST00000623996 360 ntBASIC4.18□□□□□ -1.74
LIM2P55344 AC055839.1-201ENST00000634467 498 ntBASIC4.18□□□□□ -1.74
LIM2P55344 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
LIM2P55344 SCN1A-220ENST00000641603 12506 ntBASIC4.18□□□□□ -1.74
LIM2P55344 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.18□□□□□ -1.74
LIM2P55344 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.18□□□□□ -1.74
LIM2P55344 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
LIM2P55344 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIM2P55344 AC025031.4-201ENST00000621248 3271 ntBASIC4.17□□□□□ -1.74
LIM2P55344 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
LIM2P55344 SAMMSON-213ENST00000641336 1521 ntBASIC4.17□□□□□ -1.74
LIM2P55344 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms